Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g2127 ATGGATATTATTCACTGTGCCCGTCTACTATGTGTTGTCTGTTTTGGGATGTTTCTATGCGCATCTTGTTTGGACGAATTCGATGATTCAACAGCCGTGTACATTGTAACTCTCAAGGAACCTTCTGCTGCTACTCATTATTATGGGGAGCTTAGAAAAAATACCACTTCTTTTAGAATTGGTACTTCTGGTGGATTAAGCATCCACAAACCAAGAAATATATCAAGAACACATCGAAGATATAGCTCTTACATAGCCCGAATTCATGATTCGTTATTGAGGAAGGTCTTGAAGGGGGAGAAATATCTGAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCCAAGAACAGGCAAATAAACTTTCAAAGAGGAGAGAGGTAGCAAATGTTGTTCTGGATTTCTCAGTTCGAACCGCTACGACCCATACCCCACAGTTCTTGGGCCTCCCGCAGGGAGCATGGTCTCAAGATGGTGGCTATGAATCTGCTGGAGCTGGAATTGTGATAGGGTTCATTGATACTGGCATTGACCCTACACACCCCAGCTTTGCCGACGATTTGACTGATAATCCGTTTCCTATTCCGTCTCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGGTCATGCAACCGGAAGCTTGTGGGAGCGCGCCATTTTGCAGCATCAGCTATAACAAGAGGAATATTTAATGCATCTCAGGATTATGCGTCACCATTTGATGGTGATGGACATGGCACGCATACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTGCTAGTTGCTGGGCATCACTTTGGGAATGCCAGCGGGATGGCTCCACGTTCACATATTGCTGTTTACAAAGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCTGATGTTGTGGCTGCTGTTGATCAGGCTGCTCAGGATGGGGTGGATATAATAAGTTTATCGATCACACCGAACAGGCGGCCTCCCGGTATTGCAACGTTTTTCAATCCCATAGACATGGCGCTACTCTCTGCAGTAAAGGCCGGTATATTTGTTGTGCAAGCAGCTGGGAATACTGGACCAGCACCAAAGAGCATGTCTTCATTCAGTCCATGGATCTTTACTGTCGGCGCTGCTTCTCATGATAGAAGCTACGCTAACTCTATAAGCCTTGGCAACAATGTCACCATTCCGGGAGTTGGACTTGCACCTGGAACTTATAATGACACGATGTACAAACTAGTTGCTGCAATACATGCTTTGAGCAATGGCACAAACGTTTCGGATGACATGTATGTGGGTGAATGCCAAGACGCCAGTAATTTCGATCGGGATCGAGTGGAAGGGAACCTTCTAATATGCAGCTACTCAATCAGATTCGTGCTCGGGCTTTCCACAGTTAAACGGGCTTTACAAACCGCAAAGAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTCATAGGTTTTCGACTTAACCCAATTCCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGACTCCAAGATACTTCTCCAATACTACAACTCCTCTTTGGAAGTAGATGGATTAACAAAGAAAATCTCTAAATTTGGAGCTGTTGCTTGCATATCTGGAGGATTAAAGGCAAATTATAGCACTTCCGCCCCACAAATTATGTATTATTCTGCTAGAGGACCTGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTGTGAAGCCCAACTTGGTAGCTCCTGGAAATTCCATATGGGCTGCCTGGAGCTCTGTTGCCACTGACTCTATCGAATTTCTCGGTGAAAACTTCGCAATGATGTCAGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTTGCCTCACTCATAAAGCAGAAGTTCCCTAGTCTTAGTCCTTCAGCCATTGCATCTGCGCTATCCACAACTGCTTCTCTTTACGACAGGACTGGTGGACCGATCATGGCTCAGCGTGCTTATGCTAACCCCGAACAGAACCAGTCTCCTGCTACGCCTTTTGATATGGGAAGTGGTTTTGTAAATGCAACTGCAGCTCTCAACCCGGGATTGATCTTTGATTCTAGTTACGATGATTACATGTCATTTCTTTGCGGTATCAATGGATCAGCTCCTGTGGTGTTCAACTACACGGGCCAGAACTGCAGAGTTTACAATTCTAGCATCAGTGGAGCTGATTTGAACTTGCCTTCTGTCACGATCGCGAAACTCAACCAGTCGAGAGTAGTGCAACGATCTGTGACCAACATTGCTGGACCTGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCAACTCGATTTTCAATCGGCAATGGCGAGAAACAAGTGCTAACCATATTCTTCAACGCCACGATGAACAGCTCGGTCGCTAGCTTTGGTAGAATTGGACTTTTTGGGAGTGAAGGCCATATTGTCAACATTCCTCTTTCAGTGATTTCGAAGATCTCATATAACAATACTACTAATTGA 2532 44.63 MDIIHCARLLCVVCFGMFLCASCLDEFDDSTAVYIVTLKEPSAATHYYGELRKNTTSFRIGTSGGLSIHKPRNISRTHRRYSSYIARIHDSLLRKVLKGEKYLKLYSYHFLINGFAVLVTQEQANKLSKRREVANVVLDFSVRTATTHTPQFLGLPQGAWSQDGGYESAGAGIVIGFIDTGIDPTHPSFADDLTDNPFPIPSHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVLVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSISLGNNVTIPGVGLAPGTYNDTMYKLVAAIHALSNGTNVSDDMYVGECQDASNFDRDRVEGNLLICSYSIRFVLGLSTVKRALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKILLQYYNSSLEVDGLTKKISKFGAVACISGGLKANYSTSAPQIMYYSARGPDPEDSSLDDSDIVKPNLVAPGNSIWAAWSSVATDSIEFLGENFAMMSGTSMAAPHIAGLASLIKQKFPSLSPSAIASALSTTASLYDRTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSAPVVFNYTGQNCRVYNSSISGADLNLPSVTIAKLNQSRVVQRSVTNIAGPEFYSVGWSAPYGISLKVSPTRFSIGNGEKQVLTIFFNATMNSSVASFGRIGLFGSEGHIVNIPLSVISKISYNNTTN 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20498102 20504156 + MC01g1630 Mch1g2127 677019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g2127 843 Gene3D - 710 835 - -
Mch1g2127 843 Pfam Fibronectin type-III domain 739 832 IPR041469 -
Mch1g2127 843 FunFam Subtilisin-like protease SBT1.5 172 402 - -
Mch1g2127 843 SUPERFAMILY Subtilisin-like 145 697 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch1g2127 843 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 175 186 IPR023827 -
Mch1g2127 843 Gene3D Peptidase S8/S53 domain 172 706 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch1g2127 843 Pfam Peptidase inhibitor I9 33 144 IPR010259 -
Mch1g2127 843 PRINTS Subtilisin serine protease family (S8) signature 615 631 IPR015500 -
Mch1g2127 843 PRINTS Subtilisin serine protease family (S8) signature 170 189 IPR015500 -
Mch1g2127 843 PRINTS Subtilisin serine protease family (S8) signature 250 263 IPR015500 -
Mch1g2127 843 Pfam Subtilase family 170 666 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch1g2127 843 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 143 IPR037045 -
Mch1g2127 843 CDD Peptidases_S8_3 145 652 IPR034197 -
Mch1g2127 843 CDD PA_subtilisin_like 391 526 - -
Mch1g2127 843 ProSiteProfiles Serine proteases, subtilase domain profile. 150 693 - -
Mch1g2127 843 Gene3D - 385 553 - -
Mch1g2127 843 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 796 IPR045051 -
Mch1g2127 843 ProSitePatterns Serine proteases, subtilase family, serine active site. 616 626 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g2127 Mch-Chr1:20498102 Mch8g2621 Mch-Chr8:29456335 8.17E-222 dispersed
Mch1g2127 Mch-Chr1:20498102 Mch2g0997 Mch-Chr2:6758467 2.15E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g2127 - - - 0.0