Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0012 ATGTTGTACAGCTACAAGCACAGCTTTTCGGGATTCTCGGCCAAGCTTAATGCAAGCCAGGCAATGGAGTTATCACAGATGGAAGTAGTGATATCTGTATTCAGGAGTAAAACGCTGCAACTCCACACAACAAGAAGCTGGGACTTCTTAGGCCTTCCCCTTCCGCCCCCGCCCACTAGGACGCCACTTCCGCCGCAGCTTGCCTATGGATATGACGTTGTTGTTGGCGTCTTCGATTCAGGCGTGTGGCCGGAATCCGAAAGTTTCCAAGAAGCGTGGTCCATGGGTCCAGTTCCATGCAGTTGGAAGGGAAAATGCGTGAAGGCGTACAGGTTCGACCCTGAATCAGCCTGCAACTGGAAGCTCATCGGTGCTCGCTACTATCTCAAAGGCTTCGAAGCCAAATACGGAGCGCTGAACGTGAGTGGCAGTGGCAACCCGGAGGAGTTCCCCTCCCCACGAGACTTTCTAGGGCATGGAACTCACACCGCCTCCACCGTCGTGGGCTCCGTTGTGGAGGATGTGAGTTTCCTCGGAGGCGGACTAGGTAGGGGAATTGCCCGAGGAGGAGCTCCCAGGGCTAGGCTGGCCGTCTACAAGGTGTGCTGGGGAAAGGACTACCAAGGCAAGTGCACGGAGGCGGACTTGATGGCCGCCTTCGACGATGCTCTGCGCGACGGAGTGCACGTCATCTCCGCGTCTTTAGGAGGAACGCCGCCGTTGGATCCGTTTCTAGACTCCAGCGCTGGCATCGGCTCGTTCCACGCAATGCAGCAGGGAGTGAGTGTGGTTTTCTCAGGCGGCAACGACGGGCCCCATCCCTCCCTCGTCCAAAATGTGTCTCCCTGGAGCATCTGCGTTGCCGCTTCAACTACTGATCGAACCTTCCCCACTCAAATTCAAATACTTCTCCCCAACCGCCGCATCTCTATCACCGGCGACAGCTTGATCACTGAAAGCATAACTAACGCAAAACTGGCAGATGCAATCAACTACTTTACGGACGGAATTTGCGAGCGGGCGAGTATAAGGAAAGCTAGTAAATCAGGTGCAGGGAAAGTGGTGCTTTGCTTCTCCACCATTGGTCCAACTTCCATAGAGGTAGCACAGGAAGCGGTGATGACCATCAATGCCTCTGCTCTCATATTCGCTGCGCCCCCTACCACGCAGCTACCTGACCTAGATCTCATCCCCACAGTTCGACTTGACATTACTCGGGCAACTCAAATTAGAAATGTCCTTACCGAATTGCCCAGACTGCCAGCAGTGGAGATAGGAGTTGCGAAAAATGTGATCGGGAAATCGGGGGCTCCCAGCGTGGCCTACTTCTCGTCCAGGGGACCGAGCTCACTTTCACCTGAAATTCTCAAGCCAGACATAAGTGCCCCTGGAGTGAACATATTGGCAGCATGGCCTCCGGAAACTGCTCCAACAGTGAGGCCGGGGCCGAAAGGCTCCGGCCATGTCAAGTGGAATTTCCAGTCAGGGACTTCAATGTCATGCCCTCACGTCTCCGGCGTTGTCGCCCTCATCAAATCTGCGCATCCCAAGTGGTCACCTGCAGCCATTAGATCTGCCCTCATCACCACAGCCACCAGGAGGGACTCCACTGGTGACACCATTCTAGCAGGTGGGTCCATGAAAGCATCTGACCCCTTTGACGTTGGTGCTGGCCAAGTCAATCCCTTGAAAGCATTGGATCCAGGGCTAGTCTACGACATGACGGCCAATGATTATATTCCCTTTCTCTGCAGTCTTGGGTACACAGAGCACCAAATCAGGATGCTTCTCAACCCTTCTCCTGATCAGGCTCACACCCCCCTTTGCTGTCCTTCTAATTTGGTTGCCAATCTCAACTATCCCTCCATTACACTTACACGTCTCCACTCCACCACTACCATCAAAAGGACCCTTCGCAATGTGGCACCAAACAAGAATGCGGTCTATTTTCTTAGAGTGCTTCCTCCCAGTGGAGTGCGGGTGGTGGTATGGCCCAGGATTCTGTTTTTCTCTTGCTTCACCCAACGCATTTCATACTATGTTACCATAACGCCGCTCAAGAAATCTCGACCAAGATATGATTTCGGGGAGATTCAATGGTCAAATGGCTTCCATAGCGTCACAAGTCCTCTGGTAGTAAACACATAA 2148 53.4 MLYSYKHSFSGFSAKLNASQAMELSQMEVVISVFRSKTLQLHTTRSWDFLGLPLPPPPTRTPLPPQLAYGYDVVVGVFDSGVWPESESFQEAWSMGPVPCSWKGKCVKAYRFDPESACNWKLIGARYYLKGFEAKYGALNVSGSGNPEEFPSPRDFLGHGTHTASTVVGSVVEDVSFLGGGLGRGIARGGAPRARLAVYKVCWGKDYQGKCTEADLMAAFDDALRDGVHVISASLGGTPPLDPFLDSSAGIGSFHAMQQGVSVVFSGGNDGPHPSLVQNVSPWSICVAASTTDRTFPTQIQILLPNRRISITGDSLITESITNAKLADAINYFTDGICERASIRKASKSGAGKVVLCFSTIGPTSIEVAQEAVMTINASALIFAAPPTTQLPDLDLIPTVRLDITRATQIRNVLTELPRLPAVEIGVAKNVIGKSGAPSVAYFSSRGPSSLSPEILKPDISAPGVNILAAWPPETAPTVRPGPKGSGHVKWNFQSGTSMSCPHVSGVVALIKSAHPKWSPAAIRSALITTATRRDSTGDTILAGGSMKASDPFDVGAGQVNPLKALDPGLVYDMTANDYIPFLCSLGYTEHQIRMLLNPSPDQAHTPLCCPSNLVANLNYPSITLTRLHSTTTIKRTLRNVAPNKNAVYFLRVLPPSGVRVVVWPRILFFSCFTQRISYYVTITPLKKSRPRYDFGEIQWSNGFHSVTSPLVVNT 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 148578 151538 - MC02g0007 Mch2g0012 680934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0012 715 CDD PA_subtilisin_like 310 412 - -
Mch2g0012 715 PRINTS Subtilisin serine protease family (S8) signature 495 511 IPR015500 -
Mch2g0012 715 PRINTS Subtilisin serine protease family (S8) signature 70 89 IPR015500 -
Mch2g0012 715 PRINTS Subtilisin serine protease family (S8) signature 155 168 IPR015500 -
Mch2g0012 715 ProSitePatterns Serine proteases, subtilase family, serine active site. 496 506 IPR023828 -
Mch2g0012 715 Pfam Peptidase inhibitor I9 1 42 IPR010259 -
Mch2g0012 715 CDD Peptidases_S8_3 39 532 IPR034197 -
Mch2g0012 715 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Mch2g0012 715 ProSiteProfiles Serine proteases, subtilase domain profile. 46 566 - -
Mch2g0012 715 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 711 IPR045051 -
Mch2g0012 715 Pfam Fibronectin type-III domain 617 713 IPR041469 -
Mch2g0012 715 FunFam Subtilisin-like protease SBT1.5 72 310 - -
Mch2g0012 715 Gene3D - 293 432 - -
Mch2g0012 715 Pfam Subtilase family 72 537 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch2g0012 715 Gene3D - 583 715 - -
Mch2g0012 715 Gene3D Peptidase S8/S53 domain 72 579 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch2g0012 715 SUPERFAMILY Subtilisin-like 41 570 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0818 Mch-Chr10:5713127 Mch2g0012 Mch-Chr2:148578 7.16E-45 dispersed
Mch10g0820 Mch-Chr10:5718836 Mch2g0012 Mch-Chr2:148578 2.96E-164 dispersed
Mch2g0012 Mch-Chr2:148578 Mch4g0363 Mch-Chr4:2285821 1.89E-147 dispersed
Mch2g0012 Mch-Chr2:148578 Mch2g0997 Mch-Chr2:6758467 6.81E-143 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0012 - - - 0.0