Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0040 | ATGGCTGTAACAGCCCCAGGGCAGCTCAACGTTAACGAGTCCCCATCGTGGGGATCTAGAAGTGTCGACTGCTTTGAAAAATTGGAGCAGATTGGCGAAGGCACTTATGGGCAAGTTTATATGGCCAGAGAGTTAAAAACAGGTGAAATTGTTGCACTGAAGAAAATACGAATGGATAATGAGAGAGAGGGGTTTCCTATTACTGCCATACGAGAAATCAAAATTCTAAAGAAGCTCCATCATGAAAATGTAATCAAGTTGAAAGAGATTGTGACATCTCCAGGTCCCGAGAAGGATGAACAAGGGAAGCCAGGCATGTTCTCTGTTGTAATTTATGGTAACAAGTACAAAGGTGGCATCTACATGGTTTTTGAGTACATGGACCACGATTTGACGGGTCTTGCTGATCGTCCAGGGATGAGATTTTCAGTTCCCCAAATTAAGTGCTACATGAAGCAGCTTCTCACAGGGCTTCATTATTGTCATGTAAATCAAGTACTGCATAGAGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCACGATCATTTTCTAATGATCATAATGCAAATCTAACCAATCGTGTAATTACCTTATGGTACAGACCTCCTGAATTGCTGCTTGGGTCAACAAAATATGGTCCAGCAGTCGACATGTGGTCCGTTGGTTGTATATTTGCAGAGCTTCTACATGGGAAGCCAATATTCCCCGGCAAGGATGAGCCGGAGCAGTTAAATAAGATCTTTGAGCTATGCGGTGCTCCGGATGAAGTTAATTGGCCTGGGGTTTCTAAAATCCCTTGGTACAACAATTTCAAGCCCACAAGGCCGATGAAGAGACGTATAAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAACTGTTGGAGAAGATGCTAACGCTCGATCCTTCTCAGAGGATATCTGCCAAGGATGCGCTAGATGCGGAGTATTTTTGGACGGATCCATTACCTTGTGATCCTAAAAGTTTACCCAAGTATGAATCATCACATGAGTTCCAGACAAAGAAGAAGCGCCAACAGCAACGGCAACATGAAGAAACTGCAAAGCGACAGAAGTTGCAACACCCACAGCATGCACGCCTTCCACCAATTCAGCAGTCGGGGCAAGCACACGGGCAGATGCGACCGGTACCTAACCAGCCTATTCATGGATCTCAACCGCCAGTTGCTGCGGGGCCTAGCCATCATTTTGGGAAGCCTCGTGGACCGCCAGGTCCTGGTAGGTATCCTTCAGGTGGAAATCCTCCCTCTGGATACAACCACCCAAGTCGTGGTGGTCAAGGTGGGGGTGGTTATGGTAATGCACAATATGCTCAAGGACGAGGTGCACCCTATGGTTCTGGTAACATGTCCGCTGCTGGTCCTCGAGGCGGGGGTGGGGGTGGAGGTGGTGGTGCCTATGGCGTTGGAGCTCCAAATTACACACAGAATGGTCCATATGCCGGTAGTTCTGGTACTGGCCGTGGCTCCAATGTGATGGGTGGAAACCGAAACCAGCAATACGGGTGGCAACAGTAA | 1578 | 46.96 | MAVTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMARELKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPGMFSVVIYGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRIREVFRHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHPQHARLPPIQQSGQAHGQMRPVPNQPIHGSQPPVAAGPSHHFGKPRGPPGPGRYPSGGNPPSGYNHPSRGGQGGGGYGNAQYAQGRGAPYGSGNMSAAGPRGGGGGGGGGAYGVGAPNYTQNGPYAGSSGTGRGSNVMGGNRNQQYGWQQ | 525 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 321771 | 327455 | + | MC02g0033 | Mch2g0040 | 680962 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0040 | 525 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 339 | IPR011009 | - | |
Mch2g0040 | 525 | PANTHER | CELL DIVISION PROTEIN KINASE | 25 | 331 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Mch2g0040 | 525 | MobiDBLite | consensus disorder prediction | 342 | 525 | - | - | |
Mch2g0040 | 525 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 128 | - | - | |
Mch2g0040 | 525 | FunFam | Cyclin-dependent kinase C-2 | 12 | 128 | - | - | |
Mch2g0040 | 525 | MobiDBLite | consensus disorder prediction | 344 | 373 | - | - | |
Mch2g0040 | 525 | FunFam | Cyclin-dependent kinase C-2 | 129 | 371 | - | - | |
Mch2g0040 | 525 | CDD | STKc_CDK9_like | 25 | 331 | - | - | |
Mch2g0040 | 525 | Gene3D | Transferase(Phosphotransferase) domain 1 | 129 | 371 | - | - | |
Mch2g0040 | 525 | ProSiteProfiles | Protein kinase domain profile. | 25 | 331 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0040 | 525 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 166 | 178 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch2g0040 | 525 | MobiDBLite | consensus disorder prediction | 380 | 394 | - | - | |
Mch2g0040 | 525 | MobiDBLite | consensus disorder prediction | 496 | 525 | - | - | |
Mch2g0040 | 525 | Pfam | Protein kinase domain | 25 | 331 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0040 | 525 | SMART | serkin_6 | 25 | 331 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0040 | 525 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0040 | Mch-Chr2:321771 | Mch5g0670 | Mch-Chr5:4518006 | 1.57E-112 | dispersed | |
Mch2g0040 | Mch-Chr2:321771 | Mch10g1090 | Mch-Chr10:8041558 | 3.56E-113 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77172 | PF00069 | Pkinase | 1.20E-74 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g0040 | K08819 | - | csv:101220936 | 966.066 |