Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0079 ATGGCTTCCTTCAGAGCTATTGCTTTGTTTTTGTTGGTGGGGTTGATGGTCGGAGTTTCTAAAGCTCAGCTGTGCCCCACGTTTTACGATGAGTCATGTCCCGATTTGTCGAACATTGTCCGCGGTGTGGTTCAGCAGGCTTTGGAGAATGACGACCGAGCTGGAGCTAGACTCATTCGCCTTCACTTCCACGACTGCTTCGTAGACGGGTGTGATGGGTCGATTTTACTAGAGGATCAACCGGGCGTAGTGAGTGAGCTTGGTGCTCCTGGAAATGCAAATATTACCGGGTTTAATATCGTTGACGACATCAAAGCTGCCGTCGAAGATGCTTGTCCTGGCGTCGTCTCTTGTGCTGACATCTTAGCCATTGCTTCTGTAGAATCTGTTTCGTTGGCAGGAGGACCGTGCTGGGAGGTTCAATTGGGAAGAAGAGACAGGCGAACGGCAAACTTACAAGGCGCTAATACTAGCCTTCCAAGTCCCTTCGAAAATGTTACTCAACTTAAACAAAAGTTTCGTAGAGTTGGCCTTGATTCTACTGACCTCGTTGCTTTATCTGGTGCCCACACATTCGGTCGTTCGAGATGTCGATTTTTCGACCGACGTTTAAACGTTTCAAACCCAGACAACACCCTGGACGCCTCATACGCAGCCCAGCTCCGACAGGCTTGTTCGAGCAGCAGAGACACTTTCTTGAACCTGGACCCGACCACTCCCGACGACTTCGACAACAACTACTTCACCAACCTCCAGTCCAACTTCGGCCTTCTTGGAAGCGACCAGGTCCTCTTCTCGACCCCCGGCGAGGACACCGTGGACATCGTCAAAATGTTCGCCGGCAGCCAGCAGCAGTTCTTCGACAGCTTTGGGCAGTCCATGATCAACATGGGAAATATCAGCCCTTTGACCGGAGACGAGGGAGAGATTAGGTCTAATTGCCGAAGGCTCAACTGA 957 51.1 MASFRAIALFLLVGLMVGVSKAQLCPTFYDESCPDLSNIVRGVVQQALENDDRAGARLIRLHFHDCFVDGCDGSILLEDQPGVVSELGAPGNANITGFNIVDDIKAAVEDACPGVVSCADILAIASVESVSLAGGPCWEVQLGRRDRRTANLQGANTSLPSPFENVTQLKQKFRRVGLDSTDLVALSGAHTFGRSRCRFFDRRLNVSNPDNTLDASYAAQLRQACSSSRDTFLNLDPTTPDDFDNNYFTNLQSNFGLLGSDQVLFSTPGEDTVDIVKMFAGSQQQFFDSFGQSMINMGNISPLTGDEGEIRSNCRRLN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 604129 607017 - MC02g_new0013 Mch2g0079 681001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0079 318 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Mch2g0079 318 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g0079 318 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 Pfam Peroxidase 40 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Mch2g0079 318 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 PANTHER PEROXIDASE 72-RELATED 14 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0079 318 FunFam Peroxidase 160 297 - -
Mch2g0079 318 FunFam Peroxidase 27 176 - -
Mch2g0079 318 Gene3D - 28 318 - -
Mch2g0079 318 Gene3D Peroxidase, domain 2 160 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0079 Mch-Chr2:604129 Mch2g0083 Mch-Chr2:642790 4.09E-139 dispersed
Mch2g0078 Mch-Chr2:596146 Mch2g0079 Mch-Chr2:604129 7.48E-161 tandem
Mch2g0079 Mch-Chr2:604129 Mch2g0080 Mch-Chr2:613623 8.42E-132 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0079 K00430 - csv:101212717 524.242