Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0080 ACAGGGGCTCATACGTTCGGTCGGTCGAGATGCCTCTTCTTCAACGGGCGTTTCTCCAACTTCAGCGGGAGCGGGCGGCCGGATCCGACGCTGGACCCGGCGTACAGGCAACAGCTGGAGCGAGCTTGTACGGATGGGCAAACGCGAGTGAACTTCGATCCAACGACGCCGGACACATTTGACAAGAATTACTACACCAACCTTCAAGCCAATCGAGGACTTCTCACCAGTGACCAAGTGCTGTTCTCCACTCCTGGGGCCGACACAATTGACATTGTCAACCTTCTTGGCTCGCGAGAAGGCACCTTCTTTAGACAATTTCGCCTCTCCATGATTAAGATGGGGAATATCAGACCTTTAACTGGAAATCAAGGGGAAATCAGAAGAAATTGCAGGAGGGTCAACGATTTGGGACAAGGAGCAGGAGCAGGCCATGATGTTATCTTTCATCACTCCCCACTCTCCAAAATGTCCTCCTCCAAATTCGTGGCTTTGCTTTTGTTTGTAACTCTTCTGTTTGGAGCCTCTCTCGCCCAACTCTCCGAAAACTTTTACGACAAATCTTGCCCTCGTCTCCCCAACATTGTCCGCGCCGCCGTCAAGAAAGCCATCGAAACCGACATCCGCGCCGGAGCAAAACTCATCCGCCTCCACTTCCACGACTGCTTCGTCAACGGCTGTGATGGCTCTGTTTTGCTAGAGGATGCTCCCGGCATAGACAGCGAGCTGAACTCACCCGGAAATCAAGGAATCCAAGGGCTCGAAATTGTCGACGCCATTAAATCCGCCGTGGAGGCGGAATGTCCCGGTGTCGTCTCCTGCGCCGACATCCTAGCTCAGGCCTCTAAAGACTCTGTCGATGTGCAAGGAGGGCCTAGCTGGAGAGTATTATACGGAAGAAGAGACAGCAGAATAGCCAACAAAACAGGGGCTGATCTCGGCCTCGCCAGTCCCTTCGAAACCCTCGTCGAACTCAAAGCCAAATTTGCTGCTGTTGGCCTTGGCACCACCGATCTGGTCGCTTTATCCGGAGCGCATACGTTTGGGCGATCGAGGTGCCAATTCTTCAGCCACCGATTTGCCAACTTCAACGAAACAGGGAGGCCAGATCCGACACTGGACCCAAATTACAGGCGATTCCTGGAAAGGGTGTGTTCGGCGGGGCCAGACACACGTGCGAATTTCGACCCAACAACACCGGACGTGTTCGACAAAAACTACTACAGCAACCTTCAAGTGGGGAAAGGGCTTCTGCAGAGCGACCAGGAGCTGTTCTCGACGCCCGGGGCCGACACCATCGCGATTGTGAACAGTTTCGCGGCCAGAGAAGGCACCTTCTTTAAGGAGTTCCGGCAGTCGATGATCAACATGGGAAACATTAGGCCTTTGACTGGACGCCAAGGGGAAATCAGAAGAAACTGCAGGAGGGTCAATACCGCCAGGGGATCAGGAGAAGAAGGCCACGATGTTATGTAA 1476 53.66 TGAHTFGRSRCLFFNGRFSNFSGSGRPDPTLDPAYRQQLERACTDGQTRVNFDPTTPDTFDKNYYTNLQANRGLLTSDQVLFSTPGADTIDIVNLLGSREGTFFRQFRLSMIKMGNIRPLTGNQGEIRRNCRRVNDLGQGAGAGHDVIFHHSPLSKMSSSKFVALLLFVTLLFGASLAQLSENFYDKSCPRLPNIVRAAVKKAIETDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIDSELNSPGNQGIQGLEIVDAIKSAVEAECPGVVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADLGLASPFETLVELKAKFAAVGLGTTDLVALSGAHTFGRSRCQFFSHRFANFNETGRPDPTLDPNYRRFLERVCSAGPDTRANFDPTTPDVFDKNYYSNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRQSMINMGNIRPLTGRQGEIRRNCRRVNTARGSGEEGHDVM 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 613623 623320 - MC02g0067 Mch2g0080 681002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0080 491 PANTHER PEROXIDASE 72-RELATED 168 477 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 CDD secretory_peroxidase 179 477 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g0080 491 ProSitePatterns Peroxidases active site signature. 211 222 IPR019794 GO:0004601(InterPro)
Mch2g0080 491 Gene3D Peroxidase, domain 2 1 114 - -
Mch2g0080 491 FunFam Peroxidase 183 325 - -
Mch2g0080 491 Gene3D Peroxidase, domain 2 316 457 - -
Mch2g0080 491 PRINTS Haem peroxidase superfamily signature 211 225 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Haem peroxidase superfamily signature 272 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Haem peroxidase superfamily signature 290 302 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Haem peroxidase superfamily signature 338 353 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Haem peroxidase superfamily signature 396 411 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 SUPERFAMILY Heme-dependent peroxidases 2 135 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 ProSitePatterns Peroxidases proximal heme-ligand signature. 338 348 IPR019793 -
Mch2g0080 491 FunFam Peroxidase 316 457 - -
Mch2g0080 491 ProSiteProfiles Plant heme peroxidase family profile. 1 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 Gene3D - 184 478 - -
Mch2g0080 491 SUPERFAMILY Heme-dependent peroxidases 179 478 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Plant peroxidase signature 290 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Plant peroxidase signature 337 349 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Plant peroxidase signature 213 233 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Plant peroxidase signature 252 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Plant peroxidase signature 271 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Plant peroxidase signature 452 465 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Plant peroxidase signature 394 409 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Plant peroxidase signature 410 427 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 PRINTS Plant peroxidase signature 189 208 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 ProSiteProfiles Plant heme peroxidase family profile. 179 478 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 Pfam Peroxidase 196 441 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 Pfam Peroxidase 2 93 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0080 491 FunFam Peroxidase 1 114 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0080 Mch-Chr2:613623 Mch2g0082 Mch-Chr2:634992 3.48E-153 dispersed
Mch2g0079 Mch-Chr2:604129 Mch2g0080 Mch-Chr2:613623 8.42E-132 tandem
Mch2g0080 Mch-Chr2:613623 Mch2g0081 Mch-Chr2:629035 1.08E-140 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0080 K00430 - csv:101217781 572.392