Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0081 ATGGGTTCCTCTAAGCTTACAGGCTTCGTTGTGGTGGTGGCTTTGATGCTGGGGAGCTCCCACGCTCTCAACCCTTTCTTCTACGCCTTCACATGCCCTCAGCTCCCTTTCATTGTTCTAAACACCGTCTCTCAAGCTCTACAAACCGACGACCGAGCTGCTGCCAAGCTCATTCGCCTCCACTTCCACGACTGCTTCGTCAACGGATGCGACGGGTCGGTGCTGCTGGAGGACCAACCCGGCATCGACAGTGAATTGAACGCACCTCCCAACAGTGGGATCCAAGGCCTGGACATCGTCGACAGCATCAAAGCCGCAGTGGAGAGCTCTTGCCCGGGCGTTGTTTCCTGCGCTGACATCTTGGCCATTGCATCTCAAGTTTCTGTTGTATTGTCGGGAGGGCCAGCTTGGATAGTTCCACTTGGAAGAAAAGACAGCAGAGTAGCCAATAGATCCGCAACCACAAATCTGCCCGGTCCATCTGAACCGCTTACGTCGCTCAAAGCCAAGTTCGGGGCTCTCGGGCTTGACTCCACCGATCTTGTGGCTCTGTCAGGAGCGCACACGTTCGGTCGTGCCAGATGCTTCTTCTTCACCGGACGGTTCGACAACTTCAACAGCACCGGTCTGCCGGACCCGACGCTGGACCCGGTCTACAGGGAGCAGCTTCGCCAAATGTGTACCACTCCAGTAACACGAGTGAATTTCGACCCCACCACACCAGACAAGTTCGACAAAAATTACTACAACAACCTGCAGAGCCACCGCGGGCTTCTCCAGAGTGACCAAGAGCTGTTCTCCACGCCCGGGGCCGACACCATTGGCATAGTCAACAGATTCGCGGGCAGCCAGCTTCTGTTCTTTATTCAGTTTGGGAATTCCATGATCAAAATGGGGAATCTCAGCCCTCCACCTGGCACCCCATCGGAAGTCAGATTGAACTGTAGGCGGGTCAACCCATCCAGTGCCGCCCATGATGTTATGTAA 987 55.22 MGSSKLTGFVVVVALMLGSSHALNPFFYAFTCPQLPFIVLNTVSQALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDQPGIDSELNAPPNSGIQGLDIVDSIKAAVESSCPGVVSCADILAIASQVSVVLSGGPAWIVPLGRKDSRVANRSATTNLPGPSEPLTSLKAKFGALGLDSTDLVALSGAHTFGRARCFFFTGRFDNFNSTGLPDPTLDPVYREQLRQMCTTPVTRVNFDPTTPDKFDKNYYNNLQSHRGLLQSDQELFSTPGADTIGIVNRFAGSQLLFFIQFGNSMIKMGNLSPPPGTPSEVRLNCRRVNPSSAAHDVM 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 629035 630643 - MC02g_new0014 Mch2g0081 681003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0081 328 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 FunFam Peroxidase 26 169 - -
Mch2g0081 328 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 PANTHER PEROXIDASE 72-RELATED 11 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 SUPERFAMILY Heme-dependent peroxidases 23 320 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Mch2g0081 328 Gene3D - 27 319 - -
Mch2g0081 328 Gene3D Peroxidase, domain 2 158 298 - -
Mch2g0081 328 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g0081 328 Pfam Peroxidase 41 282 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0081 328 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601(InterPro)
Mch2g0081 328 FunFam Peroxidase 158 298 - -
Mch2g0081 328 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0081 Mch-Chr2:629035 Mch6g2632 Mch-Chr6:28090963 1.03E-137 dispersed
Mch2g0080 Mch-Chr2:613623 Mch2g0081 Mch-Chr2:629035 1.08E-140 tandem
Mch2g0081 Mch-Chr2:629035 Mch2g0082 Mch-Chr2:634992 2.58E-150 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0081 K00430 - csv:101211752 563.148