Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0082 CCAACCAAATTAGTGATGGCTTCTTCTAATATTAGATTATTCTTAGCCTTCTTTTGGTTCGTGGGTTTGACAGTGGGGGGGTGTTTGGGTCAGCTAAACCCTTCATTTTACGCCAAAACCTGCCCCAACTTAGCCAAAATTGTAAATGGTGTGGTTGCTCAGGCTCTGCGAACCGATGCCCGAGCCGGAGCCAAGCTCATTCGCCTTCACTTCCACGACTGTTTTGTTGACGGGTGTGATGCGTCTATTTTGCTAGAGAACGCACCTGGCATAGACAGTGAGCTGGATGCGCCCGGAAATCAAGGGATTCAAGGACTCAACATCGTGGACGACATCAAAGCTGCTGTCGAAAAGGCCTGCCCACGCACCGTCTCCTGCGCCGACATCTTAACCCTTGCATCTAAGGAATCAGTAGTCCTGGCTGGAGGGCCGAGTTGGGTAGTGCCACTGGGACGAAGAGACAGTAGAACAGCCAATAGAGAGGGAGCCTCAAACAACCTGGCCAGTCCCTTCGACACACTCGACGGACTCAAAAGGCAGTTTGCTGCACAAGGCCTCGATTCCACTGATCTTGTTGCTTTGTCTGGAGCACATACGTTCGGACGTTCAAGATGCGGATTCTTCAGCCACCGGTTCGCGAACTTCAACGGCACGAACAGGCCGGATCCAAGCCTAGATCCGGCGTACAGAGAGCAGCTGCGGCGAATTTGCAGCAGCTCAGAGACACGTGCGAATTTCGACCCGACGACGCCGGACAAATTTGACAAGAACTATTACACGAACCTTCAGGGGCTCCGAGGGCTTCTGCAGAGCGACCAGGAGCTGTTCTCGACTCGCGGGGCTGACACCATCGCCATTGTCAACCGCTTTGCCAGAAGCCAAGACGAGTTCTTCAACAGCTTTGGGCGCTCCATGATCAAGATGGGAAACATTACCCCTTTGACTGGAAGAAGGGGAGAAATCAGACTCAACTGTAGGAAGGTCAATCCAGTGCCGCGGGCCGAGGATGGTCTTGGTCATGATGTTATGTAA 1032 52.81 PTKLVMASSNIRLFLAFFWFVGLTVGGCLGQLNPSFYAKTCPNLAKIVNGVVAQALRTDARAGAKLIRLHFHDCFVDGCDASILLENAPGIDSELDAPGNQGIQGLNIVDDIKAAVEKACPRTVSCADILTLASKESVVLAGGPSWVVPLGRRDSRTANREGASNNLASPFDTLDGLKRQFAAQGLDSTDLVALSGAHTFGRSRCGFFSHRFANFNGTNRPDPSLDPAYREQLRRICSSSETRANFDPTTPDKFDKNYYTNLQGLRGLLQSDQELFSTRGADTIAIVNRFARSQDEFFNSFGRSMIKMGNITPLTGRRGEIRLNCRKVNPVPRAEDGLGHDVM 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 634992 636445 - MC02g0068 Mch2g0082 681004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0082 343 SUPERFAMILY Heme-dependent peroxidases 31 330 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 FunFam Peroxidase 35 181 - -
Mch2g0082 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Mch2g0082 343 ProSiteProfiles Plant heme peroxidase family profile. 31 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Mch2g0082 343 FunFam Peroxidase 168 308 - -
Mch2g0082 343 PANTHER PEROXIDASE 72-RELATED 21 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 Gene3D - 36 329 - -
Mch2g0082 343 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 Pfam Peroxidase 49 292 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0082 343 Gene3D Peroxidase, domain 2 168 308 - -
Mch2g0082 343 CDD secretory_peroxidase 31 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0080 Mch-Chr2:613623 Mch2g0082 Mch-Chr2:634992 3.48E-153 dispersed
Mch2g0082 Mch-Chr2:634992 Mch6g2632 Mch-Chr6:28090963 6.21E-143 dispersed
Mch2g0081 Mch-Chr2:629035 Mch2g0082 Mch-Chr2:634992 2.58E-150 tandem
Mch2g0082 Mch-Chr2:634992 Mch2g0083 Mch-Chr2:642790 4.10E-155 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0082 K00430 - csv:101211507 531.176