Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0083 ATGTCGCCCTTTAAAGCTGCAGCTTTAGTTATGTTCGTGGGTATGATATCGGGGACCTCTTTGGCTCAGCTCAGCCCCACTTTCTACGACCAAACATGCCCTAATCTATCCACCATCGTCAGAGATGTGGTGACCCAGGCACAGGCAGGCGATGTTCGAGCAGGAGCCAAGCTTATTCGTTTTCACTTCCACGACTGCTTCGTCAATGGTTGTGATGGGTCGGTACTACTGGAGAATGCAGATGGCATAGAGAGCGAGCTAGACGCTCCTGGGAACCAAGGAATCCAAGGCTTCGAAATAGTCGACAATATCAAAGCCGCAGTCGAGGCTGCCTGCCCAGCCACCGTCTCTTGCGCCGATGTCTTAGCCATTGCATCTCGTGAATCTGCAGTACTGACTGGAGGGCCAAGTTGGGAAGTCCAACTGGGAAGAAGAGACAGCAGAACAGCAAACAGATCTGGAGCCACAAACGGCCTCCCTTCCCCTTTCGAGACCCTCCCCGAACTTCAAGTAAAATTCGCTGCAGTTGGGCTGGACTCCACTGACCTCGTGGCTCTGTCTGGAGCCCACACCTTCGGCAGGTCACGATGCAGATTCTTCACCCACCGCCTCAACAATTTCAACGGCACCGGAAGCCCAGACCCGAGCCTCGACCTCACATTTCGTGACGCGCTCATCATCGCGTGCCCCACCGGCGACCCGGACAACCGGATCGCCTTCGACGTCACCACGCCCGACGCCTTCGACAATGGCTACTTCACCAATCTCCTCAATAACCGTGGCCTTCTGCAGTCCGACCAGGAGCTCTTCTCAACCGTCGGGGCCGACACCATTGCCACCGTCAATCTTTTCGCCAGCAGCCAATCCGATTTCTTTGCTCAGTTCGGTCAGTCGATGATTAACATGGGCAACATTAGCCCTCTCACCGGCACCGATGGGGAAATTAGGTTAAATTGTAGGCTCGTTAATCCCTTGCCGACTACTGCCGTTGTGTAA 996 54.72 MSPFKAAALVMFVGMISGTSLAQLSPTFYDQTCPNLSTIVRDVVTQAQAGDVRAGAKLIRFHFHDCFVNGCDGSVLLENADGIESELDAPGNQGIQGFEIVDNIKAAVEAACPATVSCADVLAIASRESAVLTGGPSWEVQLGRRDSRTANRSGATNGLPSPFETLPELQVKFAAVGLDSTDLVALSGAHTFGRSRCRFFTHRLNNFNGTGSPDPSLDLTFRDALIIACPTGDPDNRIAFDVTTPDAFDNGYFTNLLNNRGLLQSDQELFSTVGADTIATVNLFASSQSDFFAQFGQSMINMGNISPLTGTDGEIRLNCRLVNPLPTTAVV 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 642790 643946 - MC02g_new0015 Mch2g0083 681005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0083 331 CDD secretory_peroxidase 23 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g0083 331 Gene3D - 28 323 - -
Mch2g0083 331 Gene3D Peroxidase, domain 2 160 302 - -
Mch2g0083 331 FunFam Peroxidase 160 302 - -
Mch2g0083 331 FunFam Peroxidase 27 170 - -
Mch2g0083 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Mch2g0083 331 PANTHER PEROXIDASE 72-RELATED 13 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 ProSiteProfiles Plant heme peroxidase family profile. 23 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0083 331 Pfam Peroxidase 40 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0079 Mch-Chr2:604129 Mch2g0083 Mch-Chr2:642790 4.09E-139 dispersed
Mch2g0083 Mch-Chr2:642790 Mch6g2632 Mch-Chr6:28090963 1.61E-154 dispersed
Mch2g0082 Mch-Chr2:634992 Mch2g0083 Mch-Chr2:642790 4.10E-155 tandem
Mch2g0083 Mch-Chr2:642790 Mch2g0084 Mch-Chr2:650838 1.44E-151 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0083 K00430 - csv:101217743 500.36