Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g0084 | ATGGAAACCTCGAGCCGCAGATTAAAGGTTCTTGCTTTGCTTATGGTCGTTTTTCTCATGCTGTGTGGAGCCACAAGGTCGCAGTTAACTGTGGATTTCTATAAGAGTTCTTGCCCCAACCTTCTCAAAATTGTGAGGAGAGAAGTAATAAATGCTCTAAAGAGTGAGATGCGAATGGCCGCTTCCCTTCTCCGCCTCCACTTCCACGACTGCTTTGTTAACGGTTGCGACGGATCGGTGCTGCTGGATGGAAGTGATGGGGAGCAATTTGCACTTCCAAACATAAATTCTCTTAGAGGGCTCGATGTAGTGGATAGAATCAAAGCCGCAGTGGAAAATTCTTGTAGCGGAGTGGTATCATGCGCTGATATATTAACCATAGCTGCCAGAGACTCTGTGCTCTTGAGTGGAGGACCAACATGGAGGGTTTTGTTGGGGAGAAGAGATGGATTGGTACCCAACAAAACAGGAGCGGATCAAGGACTGCCCGCCCCATTCGAAAACCTTGATGGTATTGTTAACAAGTTCACCGATGTTGGCCTAGATCTCACAGACGTCGTTGCTTTATCTGAGACCTCTTCGGCTCAGCTCAGCCCTACATTCTACGACCAAACATGCCCTAATCTATCCACCATCGTTAGAGACGCGGGTTGTGACGGGTCGGTTCTACTGAAGGACGCACCGGGCATAGAGAGCGAGCTAGACGCTCCTCCGAACCGAGGAATCCAAGGCCTCGAAATTGTGGACAAAGTCAAAGCCGCAGTGGAAGCTGCCTGCCCAGCCACCGTCTCCTGCGCGGATATCTTAGCCATTGCAGCTCTTCAATCTGTCCTACTGACGGGAGGGCCGAGTTGGGAAGTTCAATTTGGAAGAAGAGACAGCAGAATAGCAAACAGAAGTGGAGCCGAAAGCGGCCTCCCATCCCCTTTCGACAGCCTGCCCAAACTCAAACTGAAATTCGCAGCAGTTGGGCTCGACTCCACAGACCTCGTGGCTTTATCTGGAGCCCATACCTTCGGAAGGGCGAAATGCAGAGTCTTCGCCCAACGTCTCAACAATTTCAACGGCACCGGAAGCCCAGACCCGACCCTCGACCCCACATACCGGGACGAGCTCGTCGTGGCTTGCCCCACCGGCGAGCTCAACAACCAGATCGCGCTCGACGTCACCACACCCGACGCCTTCGACAATTCCTACTTCACCAATCTCCGAAACAAGCGTGGCCTTCTACAGTCTGACCAGGAGCTCTTCTCCACCTTCGATGCCGCCGAGACCATCGCCATCGTCACTGGTTTTGCAGGCAGCCAATCTGATTTCTTTGCTCAGTTTGGTCGCTCCATGATCAACATGGGGAACATTAGCCCTCTCACCGGAACCCATGGGGAAATTAGGTTAAATTGTGGCCGCGTTAAT | 1413 | 52.16 | METSSRRLKVLALLMVVFLMLCGATRSQLTVDFYKSSCPNLLKIVRREVINALKSEMRMAASLLRLHFHDCFVNGCDGSVLLDGSDGEQFALPNINSLRGLDVVDRIKAAVENSCSGVVSCADILTIAARDSVLLSGGPTWRVLLGRRDGLVPNKTGADQGLPAPFENLDGIVNKFTDVGLDLTDVVALSETSSAQLSPTFYDQTCPNLSTIVRDAGCDGSVLLKDAPGIESELDAPPNRGIQGLEIVDKVKAAVEAACPATVSCADILAIAALQSVLLTGGPSWEVQFGRRDSRIANRSGAESGLPSPFDSLPKLKLKFAAVGLDSTDLVALSGAHTFGRAKCRVFAQRLNNFNGTGSPDPTLDPTYRDELVVACPTGELNNQIALDVTTPDAFDNSYFTNLRNKRGLLQSDQELFSTFDAAETIAIVTGFAGSQSDFFAQFGRSMINMGNISPLTGTHGEIRLNCGRVN | 471 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 650838 | 655828 | - | MC02g0069 | Mch2g0084 | 681006 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g0084 | 471 | CDD | secretory_peroxidase | 28 | 470 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
| Mch2g0084 | 471 | ProSitePatterns | Peroxidases active site signature. | 60 | 71 | IPR019794 | GO:0004601(InterPro) | |
| Mch2g0084 | 471 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 329 | 339 | IPR019793 | - | |
| Mch2g0084 | 471 | FunFam | Peroxidase | 307 | 450 | - | - | |
| Mch2g0084 | 471 | SUPERFAMILY | Heme-dependent peroxidases | 196 | 471 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Plant peroxidase signature | 38 | 57 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Plant peroxidase signature | 99 | 112 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Plant peroxidase signature | 137 | 152 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Plant peroxidase signature | 184 | 196 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Plant peroxidase signature | 62 | 82 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Plant peroxidase signature | 118 | 128 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Haem peroxidase superfamily signature | 119 | 136 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Haem peroxidase superfamily signature | 60 | 74 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Haem peroxidase superfamily signature | 388 | 403 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | PRINTS | Haem peroxidase superfamily signature | 137 | 149 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | SUPERFAMILY | Heme-dependent peroxidases | 28 | 190 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | Pfam | Peroxidase | 216 | 433 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | Pfam | Peroxidase | 45 | 190 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | Gene3D | Peroxidase, domain 2 | 307 | 451 | - | - | |
| Mch2g0084 | 471 | PANTHER | PEROXIDASE 72-RELATED | 217 | 470 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | FunFam | Peroxidase | 32 | 174 | - | - | |
| Mch2g0084 | 471 | Gene3D | - | 29 | 177 | - | - | |
| Mch2g0084 | 471 | ProSiteProfiles | Plant heme peroxidase family profile. | 28 | 471 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Mch2g0084 | 471 | Gene3D | - | 217 | 471 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g0084 | Mch-Chr2:650838 | Mch6g2632 | Mch-Chr6:28090963 | 6.84E-122 | dispersed | |
| Mch2g0083 | Mch-Chr2:642790 | Mch2g0084 | Mch-Chr2:650838 | 1.44E-151 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g0084 | K00430 | - | csv:101217743 | 396.741 |