Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0126 ATGCCCTCTTATAAATTCCAAAAAACCGACTCTTCTTCCGCAATCCCCTCCCCTTCCCTCAAAACCTTAGACGACATGGACTCGGATCACCCATCGTCCGATCAACACCTCCATCTCCACGATCTCAGAGCCCTCAAGGTACTCGGAAAAGGAGCCATGGGCACCGTGTTCCTCGTCCACGACCGCCTCGCCGATGAACATGCTTCTTCCCCCTTCGCCCTTAAGGTCGTCGAGAAAGCCTCTTTTGTCTCCAAGCACGACGCCGAGCGCCGAGCCCGTTGGGAGATTCAGGTTCTTTCCCGCTTGTCCCTCCCCGAACCCCACCCCTTCCTCCCCAACATTCTTGGATCCTTCGAGTCCGACCAGTTTCTGGGCTGGGCGGTTCCCTACTGCCCCGGCGGCGACCTCAACGTCTTGCGTTACCGCCAATTCGATAGGGTTTTCTCGCCGGCCGTCATACGCTTCTATTTGGCTGAGATCGTCTGCGCGCTCGACCATCTCCATGCCATGGGCATCGTCTACCGAGATTTGAAGCCGGAGAATGTCTTGATTCAGCAATCGGGTCACGTAACTCTCACGGATTTCGATTTGTCGCGTAGCTTGATCCGGAGAGCTGTAAAAGACGTCGTTGCCCACGAGAAGCCACCCGTCGTCCGGCAAAACCACCGCCGATATTTGTCGCGATGGATCATGGCGTCCCCCAACGTTAAAGACGGCCTGAGGAAGGCCAAATCGGCTCGCGTCAGCCCCGTCAGCCGACGGAAGCCGAGTTTCACCAATGGCGAGCGGTCGAATTCGTTCGTCGGCACGGAGGAGTACGTGTCGCCGGAGGTCGTTCGCGGCGAGGGACACGAATTTGCTGTCGACTGGTGGGCCCTTGGAATTCTCACGTACGAGATGCTCTACGGTACGACGCCGTTTAAGGGGAAGAACCGGAAAGAAACGTTTCGGAACGTTCTGGTCAAAGCTCCGGAGTTGATCGGGAAGCGTTCGGACCTAACGGATTTGATCGAACGGTTGCTGCATAAGGACCCCACCAGGCGGTTGGGCTACGTACGCGGCGCGTGTGAAATCAAGGAGCATGCCTTCTTTCACGGCGTTAAGTGGGACCTATTGACGGACGTCACGCGACCGCCATTTTTAACGTCGCGAGAAGAAACGGAATGGACGGAGAAATTAACGCCCGGCGGCGTGGATATAATGGAATACTTCCATAGACAGAGGTCGCCGCCGTCGTCTCCGTCGACCTCTTTCAGTTGGCAGAATAACGACACATCTTTAACGGAATTCTAA 1293 56.15 MPSYKFQKTDSSSAIPSPSLKTLDDMDSDHPSSDQHLHLHDLRALKVLGKGAMGTVFLVHDRLADEHASSPFALKVVEKASFVSKHDAERRARWEIQVLSRLSLPEPHPFLPNILGSFESDQFLGWAVPYCPGGDLNVLRYRQFDRVFSPAVIRFYLAEIVCALDHLHAMGIVYRDLKPENVLIQQSGHVTLTDFDLSRSLIRRAVKDVVAHEKPPVVRQNHRRYLSRWIMASPNVKDGLRKAKSARVSPVSRRKPSFTNGERSNSFVGTEEYVSPEVVRGEGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLVKAPELIGKRSDLTDLIERLLHKDPTRRLGYVRGACEIKEHAFFHGVKWDLLTDVTRPPFLTSREETEWTEKLTPGGVDIMEYFHRQRSPPSSPSTSFSWQNNDTSLTEF 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 950446 952390 - MC02g_new0039 Mch2g0126 681048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0126 430 ProSitePatterns Protein kinases ATP-binding region signature. 48 75 IPR017441 GO:0005524(InterPro)
Mch2g0126 430 Gene3D Transferase(Phosphotransferase) domain 1 261 383 - -
Mch2g0126 430 PANTHER FLIPPASE KINASE 1-RELATED 33 385 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch2g0126 430 MobiDBLite consensus disorder prediction 1 19 - -
Mch2g0126 430 FunFam Serine/threonine-protein kinase OXI1 135 203 - -
Mch2g0126 430 Gene3D Transferase(Phosphotransferase) domain 1 131 204 - -
Mch2g0126 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0126 430 ProSiteProfiles Protein kinase domain profile. 42 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0126 430 Pfam Protein kinase domain 45 208 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0126 430 Pfam Protein kinase domain 259 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0126 430 SUPERFAMILY Protein kinase-like (PK-like) 40 421 IPR011009 -
Mch2g0126 430 FunFam Serine/threonine-protein kinase UCNL 42 134 - -
Mch2g0126 430 MobiDBLite consensus disorder prediction 408 430 - -
Mch2g0126 430 MobiDBLite consensus disorder prediction 1 35 - -
Mch2g0126 430 MobiDBLite consensus disorder prediction 406 430 - -
Mch2g0126 430 Gene3D Phosphorylase Kinase; domain 1 40 130 - -
Mch2g0126 430 SMART serkin_6 42 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0126 430 FunFam Serine/threonine-protein kinase OXI1 262 383 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0126 Mch-Chr2:950446 Mch9g1070 Mch-Chr9:9970923 1.47E-94 dispersed
Mch2g0126 Mch-Chr2:950446 Mch4g0368 Mch-Chr4:2323977 6.33E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77180 PF00069 Pkinase 6.10E-30 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0126 - - - 0.0