Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0132 ATGGATAGTGATCTTGATGAACTTAGGGCGCCTTTAAACCCAGTCCACCCCGATGATGGAAGTAGAACCTTGAGAATCATAGAAGCCGGAAATTTCGATGTTAATGGGTATCTGGAACAAGATATTGCAACATGCCGTCTAAGAATCAAAGGAATGACATGCACAAGCTGTGCAGAATCTATTGAAAACGCGCTTATGATGGTTGATGGAGTAAAAAGAGCAGTGGTTGGTATAACAATCGGAGAAGCAAAAGTACTTTTCGATTCAAGCTTGATTAATGAAGACCGAGTTCTTGAAGCAGTTGACGATGCTGGCTTTGATGTCGAGCTGATTAATTCTGCAGATGAAGGCAACAAAGTGCATGTAAAACTTGACGAAGTTAATTTTGAGGATATGATCACTATAAGAACATCTCTTGAGAACGCTGTTGGTGTGAATCTGGTGGAAATGGATTTTTCTCAACAAAAGGTAACCATTAGTTACGAGCCTGATCAAACCGGTCCAAGATTTCTTATCCAGTGCATTGAAGAGGCAGCCCAAGGCCTCAGGACTTATAATGCAAGCCTATATTTACCTCCAAGGAGAAGAGATATTGAGCAACTTGAAGAAATTCGTACTCACAGAAACCTATTCTTGTTGAGCTGCCTATTTTCAGTTCCAGTAGTTCTCTTGATGGTGCTTCCTATGCTTCCTCCTTATGGGGAGTGGCTGGATTACATGGTTTACAATATGCTGACCGTTGGAATGCTTCTAAAATGGATCTTATGCACACCAGTCCAGTTTATTGTTGGCTGGAGGTTTTATGTAGGATCGTACTATGCATTACGGCAAAAATCTGCAAATATGGATGTTCTGGTTGCCCTAGGAACCAATGCCGCTTACTTTTACTCCGTGTATATAGTAATTAAAGCATTCGCTTCAAAATATTTTCAAGGGGAAGATTTTTTTGAAACCAGTGCCATGTTGATATCCTTCATTCTACTTGGAAAATATTTGGAGGTCATCGCTAAAGGGAAAACATCAGATGCTTTAGCAAAGCTTGCACGTCTTGCTCCTGATACATCTTGTCTGCTGACGTTGGATGATAATAACAATATTTTGGCAGAGGTGGAGATTGATACTCAAATGCTACAGAGGAATGATGTAATTAAGATCGTTCCTGGAGCCAAAGTTCCTGTTGATGGAATTGTTATTCATGGTCAAAGCCATGTTAATGAGAGTACGATCACAGGAGAATCAAGGCCCACTATAAAAAAACCTGGCGATAAGGTTGTTAGCGGAACTGTCAATGAAAATGGATGCTTATTTGTTAAGGCCACACATGTTGGGGCTGATACTACACTTTCCCAAATTGTTCAACTCGTGGAATCAGCTCAGCTATCACGAGCATCGGCTCAGAAATTAGCAGATCAAATATCAAAATTCTTTGTTCCTGCTGTTGTCGTGGTAGCATTTCTAACATGGCTTGGATGGTTAATCTGCGGAGAAGCGGGTATATACCCTAAACACTGGATACCAAAAGGCATGGATGAATTTGAGCTTGCTCTGCAGTTTGGAATTTCAGTGCTGGTGATCGCATGCCCATGTGCCCTTGGCTTAGCAACGCCAACTGCAGTCATGGTTGCATCAGGGAAGGGTGCTTCTCTAGGTGTACTCATTAAGGGAGCAAGTGCACTTGAAAATGCATACAAGGTGAAGACTGTAGTTTTTGACAAGACTGGAACTCTGACACTTGGCAGGCCCAAGGTCGTTAGTGTTGTGCTCTTTTCTAACTTTTCAATGGCGGAGCTCTGTCATGTGGCTATGGCAATAGAGTCGAACAGCAAACACCCTTTGGCAAATGCTGTGGTGCAGCACGCAAAGAAAGTGCAACAGAAGTATGGGTTCAGTGCTGAACGTCCCGGGCACGTTGAAAACTTCGCGGTTTTCCCCGGAACAGGGGTTGGTGGAAAAGTTGATAGCAAATTTTTAGCTTTAGTAGGGAACAGGAGACTTATGCGTGCCAACAACATTCGTATGGGCACGGAAGTTGATCGGTATATTGCAGACAACGAGCACAAGGCTCAAACATGTATCTTAGTGGCTATCAACGGAAGAGTAGCTGGAGGTTTTGGTGTTAATGATCCGCCGAAGCCTGGGGCTAAAGCTGTCATATCATATCTTCGCTCAAAAGGCATCTCAAGCATAATGGTCACTGGCGATAACAGGTTCACAGCAGCTGCGCTTGCAAGGGATCTGGGAATTGATGACGTCCTTTCTGAGGTAGATCCAATTGGAAAAGCTAACAAGATCAAAGCCTTGAAGATGACAGGTGATATTGTGGCAATGGTAGGAGATGGAGTAAATGATTCGCCTGCTCTGGCTGCATCTGATATTGGCATCGCAATTGGAGCTGGAACAGATATTGCTATAGAAGCAGCTGATATAGTTCTGATGCGAAGCAATATTGAAGATGTGGTTACTGCTATCGATCTCTCGAGACAAACCACTTATCGCATATGGTTTAACTACATATGGGCACTTGGTTATAACATCATTGTTGTGCCAATTGCTGCTGGAATCTTATATCCCTTCACCGGTACTAGGTTGCCACCTTGGCTTGCTGGTGCCTGCATGGCTGCTTCATCCGTTAGTGTCGTCTGTTCTTCTCTCTTATTGAAGTGCTTTAAGAGACCTTTGAATTTCCAATCCATTATTTGA 2700 43.0 MDSDLDELRAPLNPVHPDDGSRTLRIIEAGNFDVNGYLEQDIATCRLRIKGMTCTSCAESIENALMMVDGVKRAVVGITIGEAKVLFDSSLINEDRVLEAVDDAGFDVELINSADEGNKVHVKLDEVNFEDMITIRTSLENAVGVNLVEMDFSQQKVTISYEPDQTGPRFLIQCIEEAAQGLRTYNASLYLPPRRRDIEQLEEIRTHRNLFLLSCLFSVPVVLLMVLPMLPPYGEWLDYMVYNMLTVGMLLKWILCTPVQFIVGWRFYVGSYYALRQKSANMDVLVALGTNAAYFYSVYIVIKAFASKYFQGEDFFETSAMLISFILLGKYLEVIAKGKTSDALAKLARLAPDTSCLLTLDDNNNILAEVEIDTQMLQRNDVIKIVPGAKVPVDGIVIHGQSHVNESTITGESRPTIKKPGDKVVSGTVNENGCLFVKATHVGADTTLSQIVQLVESAQLSRASAQKLADQISKFFVPAVVVVAFLTWLGWLICGEAGIYPKHWIPKGMDEFELALQFGISVLVIACPCALGLATPTAVMVASGKGASLGVLIKGASALENAYKVKTVVFDKTGTLTLGRPKVVSVVLFSNFSMAELCHVAMAIESNSKHPLANAVVQHAKKVQQKYGFSAERPGHVENFAVFPGTGVGGKVDSKFLALVGNRRLMRANNIRMGTEVDRYIADNEHKAQTCILVAINGRVAGGFGVNDPPKPGAKAVISYLRSKGISSIMVTGDNRFTAAALARDLGIDDVLSEVDPIGKANKIKALKMTGDIVAMVGDGVNDSPALAASDIGIAIGAGTDIAIEAADIVLMRSNIEDVVTAIDLSRQTTYRIWFNYIWALGYNIIVVPIAAGILYPFTGTRLPPWLAGACMAASSVSVVCSSLLLKCFKRPLNFQSII 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1008161 1013347 + MC02g0093 Mch2g0132 681054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0132 899 SFLD Haloacid Dehalogenase 551 829 - -
Mch2g0132 899 NCBIfam heavy metal translocating P-type ATPase 282 886 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Mch2g0132 899 SFLD p-type atpase 551 829 IPR044492 -
Mch2g0132 899 FunFam Copper-transporting ATPase 1, putative 337 459 - -
Mch2g0132 899 SUPERFAMILY Calcium ATPase, transmembrane domain M 314 848 IPR023298 -
Mch2g0132 899 SUPERFAMILY Calcium ATPase, transduction domain A 369 455 IPR008250 -
Mch2g0132 899 Pfam haloacid dehalogenase-like hydrolase 565 790 - -
Mch2g0132 899 PRINTS Copper-transporting ATPase 1 signature 99 119 - -
Mch2g0132 899 PRINTS Copper-transporting ATPase 1 signature 265 290 - -
Mch2g0132 899 PRINTS Copper-transporting ATPase 1 signature 44 69 - -
Mch2g0132 899 PRINTS Copper-transporting ATPase 1 signature 70 93 - -
Mch2g0132 899 PRINTS Copper-transporting ATPase 1 signature 245 265 - -
Mch2g0132 899 Pfam Heavy-metal-associated domain 47 107 IPR006121 GO:0046872(InterPro)
Mch2g0132 899 Gene3D - 576 655 IPR023299 GO:0000166(InterPro)
Mch2g0132 899 CDD P-type_ATPase_Cu-like 211 873 - -
Mch2g0132 899 NCBIfam HAD-IC family P-type ATPase 675 854 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch2g0132 899 NCBIfam HAD-IC family P-type ATPase 322 633 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch2g0132 899 Gene3D - 656 708 IPR023299 GO:0000166(InterPro)
Mch2g0132 899 ProSiteProfiles Heavy-metal-associated domain profile. 43 109 IPR006121 GO:0046872(InterPro)
Mch2g0132 899 Gene3D - 38 113 - -
Mch2g0132 899 ProSitePatterns E1-E2 ATPases phosphorylation site. 571 577 IPR018303 -
Mch2g0132 899 Gene3D - 536 833 IPR023214 -
Mch2g0132 899 Gene3D - 337 459 - -
Mch2g0132 899 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 39 894 - -
Mch2g0132 899 FunFam Copper-transporting ATPase HMA5 42 113 - -
Mch2g0132 899 CDD HMA 47 109 IPR006121 GO:0046872(InterPro)
Mch2g0132 899 Pfam E1-E2 ATPase 369 547 - -
Mch2g0132 899 SUPERFAMILY HAD-like 567 883 IPR036412 -
Mch2g0132 899 SUPERFAMILY HMA, heavy metal-associated domain 39 113 IPR036163 GO:0046872(InterPro)
Mch2g0132 899 PRINTS P-type cation-transporting ATPase superfamily signature 405 419 - -
Mch2g0132 899 PRINTS P-type cation-transporting ATPase superfamily signature 724 734 - -
Mch2g0132 899 PRINTS P-type cation-transporting ATPase superfamily signature 777 796 - -
Mch2g0132 899 PRINTS P-type cation-transporting ATPase superfamily signature 569 583 - -
Mch2g0132 899 PRINTS P-type cation-transporting ATPase superfamily signature 702 713 - -
Mch2g0132 899 PRINTS P-type cation-transporting ATPase superfamily signature 800 812 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0132 Mch-Chr2:1008161 Mch6g2674 Mch-Chr6:28440276 4.67e-313 dispersed
Mch2g0132 Mch-Chr2:1008161 Mch2g1310 Mch-Chr2:9270897 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0132 K17686 - csv:101214276 1170.22