Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0178 ATGACTTCTTCCGGAATCTCTATCGAAGGCGCCGAAATGTCTGATGCCGTTCAAGAATTAGAAATTTGCGATCAGGTGAAAATAGGAAAGAAGGTAGAGATTCAAGGAACGGGGCATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCTCTTCAAGAAACTGCCTTAGTGAGAGGTTGCGAGCACGCCTATTGTGTGACTTGCATCCTTCGATGGGCCTCGTACACTCAGAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCTTGATTGTGCATCGTTCTCTTGATGGGGGCATCCATGACTACATGTTTGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCATGGTATATACCATTGGTTGTTGAAGACCGGGAAGAAACCTATGATGATCCTGAGGAGTACTATCCGTATGAAGATGATGACGAAGAGCTTGAGGAAGATTACCTGGGTGCATCCTCAAGTCTTCGCATCGGCAACCGTAGGTGGGGGGACAATGGTTATGTGAGGGCAGGTCGACAAGAAGCACGGCCAATTTTTAGGCCAAGTGTTCCAGAGTTTGCTGCGGCTAGCTCATCACGCGAGCCTACAAAGAAAGATGCTTCTAAAGATAAAACCGGTCGACGAGCTAAAAGAGCTTTAAAACGGGAAGCTGCCGATAAAGCAGCAGCAGCAAAGCATCAGGAACATCTAGCTAGGTTGGGTCGGAATTGA 732 46.86 MTSSGISIEGAEMSDAVQELEICDQVKIGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCVTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGGIHDYMFEESVCLLLRASWYIPLVVEDREETYDDPEEYYPYEDDDEELEEDYLGASSSLRIGNRRWGDNGYVRAGRQEARPIFRPSVPEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1342010 1347447 + MC02g0130 Mch2g0178 681100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0178 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 108 IPR013083 -
Mch2g0178 243 SMART ring_2 46 88 IPR001841 -
Mch2g0178 243 SUPERFAMILY RING/U-box 45 96 - -
Mch2g0178 243 MobiDBLite consensus disorder prediction 202 243 - -
Mch2g0178 243 CDD RING-HC_Topors 43 92 - -
Mch2g0178 243 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 242 - -
Mch2g0178 243 Pfam Ring finger domain 45 89 IPR001841 -
Mch2g0178 243 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Mch2g0178 243 ProSiteProfiles Zinc finger RING-type profile. 46 89 IPR001841 -
Mch2g0178 243 MobiDBLite consensus disorder prediction 188 243 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0178 - - - 0.0