Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0178 | ATGACTTCTTCCGGAATCTCTATCGAAGGCGCCGAAATGTCTGATGCCGTTCAAGAATTAGAAATTTGCGATCAGGTGAAAATAGGAAAGAAGGTAGAGATTCAAGGAACGGGGCATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCTCTTCAAGAAACTGCCTTAGTGAGAGGTTGCGAGCACGCCTATTGTGTGACTTGCATCCTTCGATGGGCCTCGTACACTCAGAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCTTGATTGTGCATCGTTCTCTTGATGGGGGCATCCATGACTACATGTTTGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCATGGTATATACCATTGGTTGTTGAAGACCGGGAAGAAACCTATGATGATCCTGAGGAGTACTATCCGTATGAAGATGATGACGAAGAGCTTGAGGAAGATTACCTGGGTGCATCCTCAAGTCTTCGCATCGGCAACCGTAGGTGGGGGGACAATGGTTATGTGAGGGCAGGTCGACAAGAAGCACGGCCAATTTTTAGGCCAAGTGTTCCAGAGTTTGCTGCGGCTAGCTCATCACGCGAGCCTACAAAGAAAGATGCTTCTAAAGATAAAACCGGTCGACGAGCTAAAAGAGCTTTAAAACGGGAAGCTGCCGATAAAGCAGCAGCAGCAAAGCATCAGGAACATCTAGCTAGGTTGGGTCGGAATTGA | 732 | 46.86 | MTSSGISIEGAEMSDAVQELEICDQVKIGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCVTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGGIHDYMFEESVCLLLRASWYIPLVVEDREETYDDPEEYYPYEDDDEELEEDYLGASSSLRIGNRRWGDNGYVRAGRQEARPIFRPSVPEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN | 243 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1342010 | 1347447 | + | MC02g0130 | Mch2g0178 | 681100 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0178 | 243 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 28 | 108 | IPR013083 | - | |
Mch2g0178 | 243 | SMART | ring_2 | 46 | 88 | IPR001841 | - | |
Mch2g0178 | 243 | SUPERFAMILY | RING/U-box | 45 | 96 | - | - | |
Mch2g0178 | 243 | MobiDBLite | consensus disorder prediction | 202 | 243 | - | - | |
Mch2g0178 | 243 | CDD | RING-HC_Topors | 43 | 92 | - | - | |
Mch2g0178 | 243 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 242 | - | - | |
Mch2g0178 | 243 | Pfam | Ring finger domain | 45 | 89 | IPR001841 | - | |
Mch2g0178 | 243 | ProSitePatterns | Zinc finger RING-type signature. | 64 | 73 | IPR017907 | - | |
Mch2g0178 | 243 | ProSiteProfiles | Zinc finger RING-type profile. | 46 | 89 | IPR001841 | - | |
Mch2g0178 | 243 | MobiDBLite | consensus disorder prediction | 188 | 243 | - | - |
Pathway information
