Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0201 ATGAAATATTGGGGCGGCATTAAGTTGGTTGTTTTGTTGGCAGCAGTACTACCGATATGCATCTACGGCGTGTCGCCACCTATACCGACCGATAAGACGAAACTAAACAGCTGGTTTTCGGAGAATGTGAAGCCGTTAGCCGGTCGTGAGGCGGAGCTGGACCCAAAGCTGGTGGCCGCAGAAAAGAACGCCAAAGTGGTAAAGGTAATGGCGGACGGAAGTGGAGATTTCAAGACCATCACCGAAGCCATCAACAGCGTTCCCAAAGGCAACACGAACCGAGTTGTGATCTGGATCGGAGGAGGAGTTTACAAAGAGAAGCTTCTTGTTGACAGAGCAAAGCCTTTTGTCACTCTCTATGGATCTCCTGCCAATGTCCCCAATTTGACATTTGACGGCGTTGCCAAAAAGTACGGAACCGTCTACAGCGCAACGTTGATTGTGGAGTCTGACTATTTCACTGCTGCCAATCTCAACATCATTAATACGTCGCCAAGGCCGGATGGAAAACCAGGACAACAGGCATTGGCAGCCAGACTGATGGGGGATAAAGCGGCCGTTTACAATTGCAAATTCTATGGGTTTCAAGATACTCTCTGTGACGACGCTGGTTTGCATCTCTTCAAGGATTGCTACATTCAAGGGACTATCGATTTCATTTTTGGGAGAGGAACGTCTCTTTATTTGAACAGTGAGCTAGATGTGCTGGGAGATGGGAAATTGAAAGTGATCACGGCACATTCAAGAGAAGAAGAATCAGACACCAGTGGATATTCATTTGTGCATTGCAGCATTGTAGGAACTGGTGGCAGAAACACTTACTTGGGAAGAGCCTGGAAGCCGAGGTCCAAAACTATCTTCTCTTACACCACCATTGCTGACATCCTTCATCCCGAAGGCTGGCACGACATGCGCCATCATGGCTTTGACGCCACTGTTTTTTTCGCAGAACACAAGTGTACGGGCCCGGGGGCAGATCGAACTGGACGTGTGAAATACGGCAAAGAATTGACCGATAAGGAAGTGAAGCCATACCTCACCCTTGATTTCATTCAAAGTGACAAATGGTTGCTTCCTCCTCCCACTGATCCTAAGGCTCCCACTGATCCTAAGGATCCTAAGGCTGCCACTGATCCTAAGGATCCTAAGGCTCCCACTGATCCTAAGGATCCTAAGGCTCCCACTGATCCTAAGGCTCCCACTGACCCTAAGGCTTAG 1218 48.69 MKYWGGIKLVVLLAAVLPICIYGVSPPIPTDKTKLNSWFSENVKPLAGREAELDPKLVAAEKNAKVVKVMADGSGDFKTITEAINSVPKGNTNRVVIWIGGGVYKEKLLVDRAKPFVTLYGSPANVPNLTFDGVAKKYGTVYSATLIVESDYFTAANLNIINTSPRPDGKPGQQALAARLMGDKAAVYNCKFYGFQDTLCDDAGLHLFKDCYIQGTIDFIFGRGTSLYLNSELDVLGDGKLKVITAHSREEESDTSGYSFVHCSIVGTGGRNTYLGRAWKPRSKTIFSYTTIADILHPEGWHDMRHHGFDATVFFAEHKCTGPGADRTGRVKYGKELTDKEVKPYLTLDFIQSDKWLLPPPTDPKAPTDPKDPKAATDPKDPKAPTDPKDPKAPTDPKAPTDPKA 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1526702 1528545 + MC02g0152 Mch2g0201 681123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0201 405 ProSitePatterns Pectinesterase signature 2. 213 222 IPR033131 -
Mch2g0201 405 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 358 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Mch2g0201 405 SUPERFAMILY Pectin lyase-like 64 361 IPR011050 -
Mch2g0201 405 Pfam Pectinesterase 67 353 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch2g0201 405 FunFam Pectinesterase 62 359 - -
Mch2g0201 405 MobiDBLite consensus disorder prediction 367 405 - -
Mch2g0201 405 MobiDBLite consensus disorder prediction 355 405 - -
Mch2g0201 405 Gene3D - 61 360 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0201 Mch-Chr2:1526702 Mch6g1002 Mch-Chr6:7068394 4.85E-130 dispersed
Mch2g0201 Mch-Chr2:1526702 Mch2g0202 Mch-Chr2:1530949 8.41E-201 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0201 K01051 - csv:101205095 521.931