Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0202 ATGAAATATTGCATTGATGCCCTCTCTCTAACTAGATTGCTGACTCTGTTGGCAACCTTTGCACTCATCTTGACTGCTTCGCCGCCTGTGCCGGCCGACAAGTCGCAAGTAAACAAATGGTTTTCCGACAATGTGAAGCCGTTAGCCGATCGCAAGGCGGAGCTGGATCCAGCGCTCGTGGCTGCCGAAGAGGGCGCCACCGTGGTTAAGGTGAGGGCCGACGGAAGTGGAGATTTCAAGACCGTCACAGAAGCCATCAACAGCGTGCCCACAGGTAACACCAAACGAGTTGTGATTTGGATCGGAGGAGGAGTTTACAAAGAGAAGCTTAAGATTGAGAGAACAAAGCCATTCGTTACCCTTTATGGGTCTCCTAATAATATGCCCAATTTGACATTTGATGGCGATGCAAACAAATTTGGCACTGTCTACAGTGCAACATTGACTGTTGAGTCTGATTATTTCACCGCTGCCAATCTCATCATCGTGAATTCATCACCGAGGCCAGATGGAAAAAGAAAAGGAGCACAAGCATTAGCGGCCAGACTAATGGGGACCAAAGCGGCGGTTTACAATTGCAAATTCATTGGGTTTCAAGACACTCTTTGTGATGATGACGGTTTGCATCTCTACAAGGATTGCTTCATTCAAGGGACAGTCGATTTCATTTTCGGGAAAGGAACATCTCTTTATTTGAATAGTCAGCTGGATGTGGTGGGAGATGGGGGATTGGCAGTGATCACAGCACATTCAAGAGAAGAAGAATCTGACCCCAGTGGATATTCATTCGTGCATGGCAGCATTACAGGAACTGGCGGCAAAAACACTTACCTAGGAAGAGCTTGGATGGCTAGGTCCAGAACTGTCTTCGCCTACACGACCATGGCTGACATCATCAATCCCGAAGGCTGGAACGACATGAAACATCCTGGCTTTGACAGCACTGTTTTGTTCGGAGAATACAAGTGTTCGGGACCGGGGTCGGAACCAAGTGGACGTGTGAAATACAGCAAGCAATTGAGCGATGTGGAAGTGAAGCCCTTCGTCAGCCTTGGGTTCTTGCAAAGTGACAAATGGTTGCTTCCTCCTCCCAATCCTGAGGCATAG 1107 48.24 MKYCIDALSLTRLLTLLATFALILTASPPVPADKSQVNKWFSDNVKPLADRKAELDPALVAAEEGATVVKVRADGSGDFKTVTEAINSVPTGNTKRVVIWIGGGVYKEKLKIERTKPFVTLYGSPNNMPNLTFDGDANKFGTVYSATLTVESDYFTAANLIIVNSSPRPDGKRKGAQALAARLMGTKAAVYNCKFIGFQDTLCDDDGLHLYKDCFIQGTVDFIFGKGTSLYLNSQLDVVGDGGLAVITAHSREEESDPSGYSFVHGSITGTGGKNTYLGRAWMARSRTVFAYTTMADIINPEGWNDMKHPGFDSTVLFGEYKCSGPGSEPSGRVKYSKQLSDVEVKPFVSLGFLQSDKWLLPPPNPEA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1530949 1532665 + MC02g0153 Mch2g0202 681124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0202 368 ProSitePatterns Pectinesterase signature 2. 216 225 IPR033131 -
Mch2g0202 368 Gene3D - 64 363 IPR012334 -
Mch2g0202 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 360 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Mch2g0202 368 SUPERFAMILY Pectin lyase-like 66 361 IPR011050 -
Mch2g0202 368 Pfam Pectinesterase 69 356 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch2g0202 368 FunFam Pectinesterase 64 362 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0202 Mch-Chr2:1530949 Mch6g1002 Mch-Chr6:7068394 1.28E-135 dispersed
Mch2g0201 Mch-Chr2:1526702 Mch2g0202 Mch-Chr2:1530949 8.41E-201 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0202 K01051 - csv:101205095 582.793