Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0263 ATGAGCGGCGAAAGCCGAAGGCGAGGCCGCGGAGACAACACTAGGTTGAAGAAGCAGAGGATAATCCGGTCCGCCGAGGAGGAGATCGAATCAAAGCTAGGATTTGATCTCTTCTCTGAAGGCGATAAGAGGCTTGGATGGTTGCTCACTTTCGCTCCTTCATCTTGGGAGGATCAGGATACCGGAAAGGTCTTTAGCTGTATTGATCTTTATTTTGTGACACAGGATGGCAGCAGCTTCAAATCAAAATATAAGTTTCGTCCTTATTTCTATGCTGCCACAAAGGATAAAATGGAAACTGATGTGGAGGCTTATTTGAGACGGCGTTATGAAGGTCAAATAGCTGATATTGAGATTTTAGAAAAAGAAGACCTTGATCTTAAGAATCATCTGTCAGGCCTTTGCAAGGCATATTTAAAGCTATCATTTGACACTGTTCAAGAATTGATGCATGTAAAGAGTGAACTTTTGCATGTTGTTGAAAGCAATTGGGCAAAGTCTGATGCTGCGGAAGCATATGATTCTATTTTATTTGGGAAAAGGGAACAAAAGCCTCAAGATTTTCTAGAATGTATTGTTGACCTTCGGGAGTATGATGTTCCTTACCATGTTCGCTTTGCTATTGATCATGATTTGCGCTGTGGACAATGGTACGATGTTAGTGTATCAAGCACTGGTGTTATGCTTGAGAAGAGAAAAGATCTTCTGCAACGTGCTGAAGTTCACGTATGTGCCTTCGATATTGAGACCACAAAGCTACCATTGAAATTTCCAGATGCTGAATATGACATGATAATGATGATTTCCTATATGATTGATGGACAAGGGTACCTCATTATCAACAGAGAGTGTGTTGGAGAAGATATTGAGAATTTGGAGTACACTCCAAAACCAGAATACGAAGGATTCTTCAGAGTGACCAATGTGAAAAATGAGCTTGAGCTTCTCAAACTGTGGTTTGCCCATATGCGGGAGGTGAAACCTGGTATCTATGTCACCTATAATGGTGATTATTTCGATTGGCCATTCCTTGAAAGCAGAGCTGCCTATCATGGGTTTAAAATGAGTGATGAAGTGGGATTTCAATGTGACAAGAATCAGGGGGAATGCCGTTCAAAATTTGCTTGCCATTTGGATTGCTTTGCGTGGGTAAAGCGTGATAGCTATCTTCCTCAGGGTAGCCAGGGTTTGAAGGCTGTCACAAAAGCAAAATTGGGTTATGATCCTCTTGAAGTGAATCCTGAGGATATGGTGCGGTCTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTATTCTGTTTCAGATGCTGTTGCTACGTACTACTTGTACATGACCTATGTTCACCCTTTCATTTTTTCTCTAGCAACTATAATTCCAATGTCACCAGATGAGGTATTGCGGAAGGGAAGTGGGACACTCTGTGAAATGCTTCTAATGGTTCAGGCTTACAAGGCCAATGTTGTGTGTCCTAACAAACATCAATCAGATCCAGAGAAGTTCTATAGCAATCGGCTTCTTGAAAGTGAGACATATATAGGTGGTCATGTAGAATGCCTAGAGAGTGGTGTTTTTAGATCTGACCTTCCTACCAGTTTTAGGCTTGATCCATCTGCTTATGATCAATTGATATACAACTTGGATAGAGATCTGCAGTATGCCATACAAGTAGAAGGAAAGATGGACTTGGAGTTGGTGTTAAACTATAATGACGTGAAGAACGCAATCATGGAGAAGCTTATTAGATTGCGGGATGAGCCTGTACGTGAAGAGGGCCCTCTGATATATCACCTTGACGTAGCTGCAATGTATCCTAACATTATTTTGACAAATAGGCTTCAGCCGCCATCAATAGTTACAGATGAGGTTTGTACTGCTTGTGATTTCAACCGTCCTGGGAAAACTTGTCTACGGAAACTTGAATGGGTTTGGCGTGGAGAGGTATTCATGGCTAAAAAAAGTGACTATTATCATTTGAAGAAGCAAATTGAGTCTGAGTTTGTTGATAGCGGTAATGTTCGGTTGTCAAAATCATTTCTTGAACTTCCGAAGTTGGAGCAACAGACAAAGCTCAAAGAGCGTTTAAAGAAATACTGTCAAAAGGCTTATAAACGGGTACTTGATAAGCCAGTCACTGAAGTTCGAGAAGCAGGGATTTGCATGAGAGAAAACTCCTTCTATATTGACACTGTCCGTAGTTTTCGAGATAGAAGGTATGAGTACAAAGGGCTAAATAAAGTATGGAAGGGGAGACTATCAGAAGCTAAAGCGAGTGGAAATTCAATCAAGATCCAGGAAGCCCAAGACATGGTGGTTCTTTACGATTCTTTACAACTTGCTCATAAATGTATCCTCAACTCCTTTTATGGATACGTGATGCGAAAGGGTGCCCGATGGTATTCAATGGAAATGGCCGGGGTAGTTACATATACAGGAGCAAAAATCATTCAGAATGCCTGTCTGCTAATTGAGAAAATTGGAAAACCTTTGGAGTTAGACACTGATGGTATCTGGTGTGCACTACCTGGATCATTCCCAGAGAACTTCACCTTCAAAACAAAAGACTTGAAGAAGTTGACAATTTCATATCCATGTGTTATGCTTAATGTTGATGTGGCTAGGAACAACACAAATGACCAATACCAGACGCTTATAGATCCTGTGAGGAAAATATATAAAACGCATAGTGAATGCTCAATAGAATTTGAAGTCGATGGACCATACAAGGCAATGATCCTTCCTGCTTCCAAGGAAGAAGGCATTTTGATCAAGAAGAGATATGCTGTCTTCAATGATGATGGAACCCTTGCGGAGCTAAAAGGCTTTGAGATCAAGCGTAGGGGGGAGTTAAAGCTCATCAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTTCATGGTTCCACCTTAGAAGAATGCTACTCAGTAGTCGCATCTGTTGCCAATCGTTGGCTTGATCTTCTAGATAATCAAGGAAAAGATATTGCAGATAGTGAGTTGCTCGATTATATATCTGAATCCAGTACCATGAGTAAGTCCTTGGCTGACTATGGGGAGCAGAAGTCTTGTGCTGTTACCACTGCAAGACGTCTTGCTGATTTTCTTGGTGATGCAATGGTCAGGGATAAAGGTCTACGTTGTCAATATATAGTTGCATGTGAACCTAAGGGAACACCTGTAAGCGAGCGTGCTGTTCCAGTTGCAATCTTTGAAACTGATGCTGAAATAATGAAATTTTATGTACGCAAATGGTGCAAGATTTCATCAGAAGTTGGCATCCGATCCATCATTGACTGGTCATACTACAAGCAACGACTAAGCTCAGCCATTCAAAAAATTATAACAATTCCAGCTGCCATGCAAAAGGTTGCAAATCCTGTCCCTAGGGTGGTTCATCCTGATTGGTTACATAAGAAAGTTCGTGAGAAGGATGATAAATTTCGCCAACAGAAAGTAGCTGATATGTTTGCATCCTTAAACAGAGGTAAATATTCAGGAAAGAACAGTGATGATGGTTGCAGCAAACATGTGATGAATGAAGAGAACTCTGAAGATTTAGAAGACTTCCAAAAGAAAGCAAGTTCTACAAATGGTCCAAAACCAGTTGTGCGATGTTATGATGTCAGAGGCATGAAACATCCAAGAGATAGTGAAGTGGACTCTGTGAGGCAGGTGAATTTTAATGGTGGAGGATGTGAGCCTTCTTCACCATTGCATGTTGAAAACGTTGACAAAAATGTAGATTACCATGGATGGCTTGAAATGAAGAAGCGAAAGTGGAAGGATACTTTGGACAAGAGGAAGAAGCAAAGATTGGTAAATTTAAGGACTTCGCTTCCTGCTAATGATGTTACATGGGAGTTAAATGCTGCTATGAATAATAAAGAGACTCCTAGAACTTCTGGTGTTGGTTCATATTTCAAGAGGCATGAAGTATCTATAACACGCTGCCACTGGCAGATCTTACAGCTTGTTCATAGTTCACAGAGTGGCCAATTTTTTGCATGGGCTGTTGTTGAAGGAGTTATGCTAAAGATTCCTATTACTGTTCCTAGAGTTTTTTACCTTAATTCTAAAGTACCCATTACAGAAGAATTTGTGGGTAGGCGTATTACCAAAACTCTTCCTCATGGAAGGCGCAGTTATAACCTATATGAGGTTGTGACTGATGAAGGTCAATTTAGGACGCTGAGCAATAAACTTGCAGCCCTCCTAGCAGATCCAGAAGTTGAGGGAATCTATGAAAGCAAGGTGCCACTGGAGTTCAAGTCCATCTTCCAGATTGGTTGTGTCTGTAAAGTTGATAAAACTGCTAAAAAACGAAACATTCATGATGGATGGAATCTGGATGAACTGCAAATGAAGACTACAACTGAATTCAGTTATCTGGAAAAGCCAATCTCTTTCTTCTATCTGTATCACAGTATTTCTGAAGGAAGAGCGATCTACATTACTTATTTTCCCTCCACAAGATCAATGCTCGTGGTGGTGGTTAGTCCTTATCCAAACAAAGACTTGTCATCAAGTTTTCTTGAAAGGCAATTCCGTGAAGCTTGTCAAATGCTGTCTGGTCAATCACAACCTCCTATGAGTGGTATTACTTACAAGGTTGACTATGTTGTTAACATCAAAGAAGCTGAAGTGATTTTGCAAAGATCGATAACAGATCACAGGATCATAAACCACGGACCTATTGTAGCTGTAATTCAATGCCCAAATGTGCAGCTGCTGAAGTCAGGTGTGAGAGCGCTAGATGATTTTCCATGCGTGAGCATTCCTTCTAATGCTCGTGATAGCCAATATCAGGTTCTTGGTTGGCAACAAATAGCTGCAAAGATTGGAATGCAACGTTGTGCTGCATCATCCCAATGGTTGAATGAGAGAATCTCTCTTGCAAGATATGCCCATGTACCATTGGGAAATTTTGAACTTGATTGGCTAATTTTTACAGCAGATATTTTCTTTTCAAGGGCATTACACGATCAGCAGCAGGTACTTTGGATATCGGATGATGGTGTTCCAGATATAGGAGGCATTAATATAGAAGATGCGTGTTTTGCGGATGAGGTCCAACAACCTTTACTGATATACCCTGGAGCATATAGAAAAGTTTCTGTGGAGCTGAAGATCCATCATTTGGCTGTCAACGCTCTGCTGAAGAGCAGCCAAGTGAATGAAATGGAAGGAGGTGGCTTGTTTGGCTTTGAACGTGATATGCAATGTGGGGCACAACTTTCTAATGAAGAAGGTGGCTTTGATGAGGCTGCGTCATGTGCTCCAGCATTTCGTGTCCTGAAACAATTGATACAAAGGTGTCTTGCAGATGCAGTTACATCTGGAAATGTATATGCCGATGCAATTTTGCGGCATCTGTACCGATGGATTTGCAGTCCCCAATCAAGACTTCATGACCCAGCTCTTCATCGCTTGCTTCACAAGGTTATGCAAAAGGTGTTTGCTCTTTTGTTGGCCGAACTACGCAAATTAGGTGCCACCATTATATTTGCGAACTTCTCAAGAATTATTATAGACACGGGAAGGTTTGATCTCTCTGCTGCTAAGGCATACTGTGATAGCTTGCTGAAAACACTGCAAACAAGGGATCTGTTTGAGTGGATTGAGCTGGAACCATTACAGTTTTGGCACTCACTGTTGTTTTTGGATCAGTTCAACTTTGGTGGAATCCCAGCAAGAGATGAGGAATTCACAGATATTGAATCTCAAGTTGATATAGTGGCCAACTGGAACATTGCTGAATATCTGCCCAAGAAGATTCAGGATCACTTTGTTTTTATAATCTCTCAATTTTTATATATTCCATGGAATTATGCAACCAAGCAAGCTGCAGCAAGAGCATCGTTGCAGCACGGTGACAAATGTACCCCATCCGTTACTGTGGGAGCTGCCGAATCATTTGAATCACGCGTAACAGAACATCTCAAAGAGCAGCTAAGCTCTTACTTCAGCGACAAACTATTGGGGATTGTTCGTGATATTGTTCTTCATATGAAAGGGAAGGACAAGAACACCCAGGATGTTTTACCAGAACAACCTTCTGGTAGTATCCACAAAGGAGATGCTGCATTGGAATTTATTAAGCACGTCTGTGCAGTTTTGGCGCTTGATCAAAATGTCCAGCATGATGTTCTGGTAATGAGGAAGAATTTACTCAAGTATGTGCGTGTCAGAGAGTTTGCACCAGAAGCTGAGTTTTCTGATCCCTGTCCCTCCTTAATCTTACCCAACGTTATTTGCAGCTATTGTGACGACTGTCAAGATTTGGACTTGTGCCGCGACTCGGCTTTACAAGCACCGGAATGGCACTGCGCTGTGCCACAATGCGGGCAACCATACAACCAAGAAATGATGGAGAATGCACTGCTTCAAATTGTGCGGCAGAGGGAGCGACTCTATCACGTACTGGATCTGGTATGCGTTCGCTGCAAGCAGGTCAAAGCGGCTCATTTGTCGGAGCAATGTGCTTGTGCTGGCTCATTCAAATGCAAAGAGGACGCAAAAGAATTTTTCAGCAAAATGCAGATTTTCCTCAACGTTGCCACTCGTCAAAAGTTTCAACTATTACAAGAGTTCACCTCGTGGATCATAGATGATACAAGTTCCATAAGTTGCTAA 6630 41.55 MSGESRRRGRGDNTRLKKQRIIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSWEDQDTGKVFSCIDLYFVTQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGQIADIEILEKEDLDLKNHLSGLCKAYLKLSFDTVQELMHVKSELLHVVESNWAKSDAAEAYDSILFGKREQKPQDFLECIVDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVMLEKRKDLLQRAEVHVCAFDIETTKLPLKFPDAEYDMIMMISYMIDGQGYLIINRECVGEDIENLEYTPKPEYEGFFRVTNVKNELELLKLWFAHMREVKPGIYVTYNGDYFDWPFLESRAAYHGFKMSDEVGFQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRSAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVVCPNKHQSDPEKFYSNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYDQLIYNLDRDLQYAIQVEGKMDLELVLNYNDVKNAIMEKLIRLRDEPVREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDSGNVRLSKSFLELPKLEQQTKLKERLKKYCQKAYKRVLDKPVTEVREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGRLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNACLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTKDLKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVRKIYKTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDAMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKDDKFRQQKVADMFASLNRGKYSGKNSDDGCSKHVMNEENSEDLEDFQKKASSTNGPKPVVRCYDVRGMKHPRDSEVDSVRQVNFNGGGCEPSSPLHVENVDKNVDYHGWLEMKKRKWKDTLDKRKKQRLVNLRTSLPANDVTWELNAAMNNKETPRTSGVGSYFKRHEVSITRCHWQILQLVHSSQSGQFFAWAVVEGVMLKIPITVPRVFYLNSKVPITEEFVGRRITKTLPHGRRSYNLYEVVTDEGQFRTLSNKLAALLADPEVEGIYESKVPLEFKSIFQIGCVCKVDKTAKKRNIHDGWNLDELQMKTTTEFSYLEKPISFFYLYHSISEGRAIYITYFPSTRSMLVVVVSPYPNKDLSSSFLERQFREACQMLSGQSQPPMSGITYKVDYVVNIKEAEVILQRSITDHRIINHGPIVAVIQCPNVQLLKSGVRALDDFPCVSIPSNARDSQYQVLGWQQIAAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINIEDACFADEVQQPLLIYPGAYRKVSVELKIHHLAVNALLKSSQVNEMEGGGLFGFERDMQCGAQLSNEEGGFDEAASCAPAFRVLKQLIQRCLADAVTSGNVYADAILRHLYRWICSPQSRLHDPALHRLLHKVMQKVFALLLAELRKLGATIIFANFSRIIIDTGRFDLSAAKAYCDSLLKTLQTRDLFEWIELEPLQFWHSLLFLDQFNFGGIPARDEEFTDIESQVDIVANWNIAEYLPKKIQDHFVFIISQFLYIPWNYATKQAAARASLQHGDKCTPSVTVGAAESFESRVTEHLKEQLSSYFSDKLLGIVRDIVLHMKGKDKNTQDVLPEQPSGSIHKGDAALEFIKHVCAVLALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFSDPCPSLILPNVICSYCDDCQDLDLCRDSALQAPEWHCAVPQCGQPYNQEMMENALLQIVRQRERLYHVLDLVCVRCKQVKAAHLSEQCACAGSFKCKEDAKEFFSKMQIFLNVATRQKFQLLQEFTSWIIDDTSSISC 2209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1946701 1977022 - MC02g0207 Mch2g0263 681185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0263 2209 SMART polmehr3 239 842 IPR006172 GO:0000166(InterPro)|GO:0003676(InterPro)|GO:0003887(InterPro)
Mch2g0263 2209 FunFam DNA polymerase epsilon catalytic subunit 756 936 - -
Mch2g0263 2209 CDD POLBc_epsilon 503 1121 - -
Mch2g0263 2209 SUPERFAMILY DNA/RNA polymerases 486 1114 IPR043502 -
Mch2g0263 2209 Pfam Domain of unknown function (DUF1744) 1524 1894 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Mch2g0263 2209 SMART DUF1744_2 1509 1894 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Mch2g0263 2209 MobiDBLite consensus disorder prediction 1167 1190 - -
Mch2g0263 2209 CDD DNA_polB_epsilon_exo 240 444 - -
Mch2g0263 2209 MobiDBLite consensus disorder prediction 1166 1201 - -
Mch2g0263 2209 SUPERFAMILY Ribonuclease H-like 64 467 IPR012337 -
Mch2g0263 2209 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 3 2174 IPR029703 GO:0000278(PANTHER)|GO:0003677(PANTHER)|GO:0003677(InterPro)|GO:0003887(PANTHER)|GO:0003887(InterPro)|GO:0006260(InterPro)|GO:0006272(PANTHER)|GO:0006281(InterPro)|GO:0006287(PANTHER)|GO:0006297(PANTHER)|GO:0008310(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0045004(PANTHER)
Mch2g0263 2209 FunFam DNA polymerase epsilon catalytic subunit 940 1124 - -
Mch2g0263 2209 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
Mch2g0263 2209 Pfam DNA polymerase epsilon catalytic subunit A, thumb domain 945 1120 - -
Mch2g0263 2209 Pfam DNA polymerase family B, exonuclease domain 194 400 IPR006133 -
Mch2g0263 2209 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Mch2g0263 2209 Gene3D - 940 1124 IPR042087 -
Mch2g0263 2209 Gene3D - 238 468 IPR036397 GO:0003676(InterPro)
Mch2g0263 2209 Gene3D Palm domain of DNA polymerase 751 936 IPR023211 -
Mch2g0263 2209 Pfam Zinc finger domain of DNA polymerase-epsilon 2140 2201 IPR054475 -
Mch2g0263 2209 Gene3D DNA Polymerase, chain B, domain 1 57 232 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0263 Mch-Chr2:1946701 Mch3g1547 Mch-Chr3:17495842 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0263 K02324 - csv:101208568 4046.89