Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0265 | ATGGAGTCTTCTCCCGACGACATCGCCGACGACCTTCAGAGCCTCAGCTTCAACTCCACCAACACCAACCGCAGCACCAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCGCTCACATCGTCGCTTCCCTCCCTTCCCTTCTCAACAAGCCTCACGCGCCGTCCTCCGACCCTTGCTTCTCCGCCATCAACCGGATCCGATCCGAATCGGCCTCTCGCCAACTCGCCTTCTCCGACCTCAAATTCTCGCACCGCCTCGGCTCCGGCGACATTGGCTCCGTCTACCTCGCCGGGCTGAAGTGCGCCGGAGCCGACGGATGCATGTTCGCCGCGAAGGTAATGGATAAGAAGGAACTGGCGAGCCGGAGTAAGGAAGGGCGGGCGAGGACGGAGAGGGAAATACTGGAGTCGTTGGACCATCCGTTTCTCCCGACGCTATACGCGAGCATCGACTCGCAGAAGTGGCTCTGCCTCTTGACCGAGTTCTGTCCCGGCGGCGACCTCCACGTGCTACGGCAACGACAGCCGAGCAAACGCTTCGATGAACTCGCCGTAAGATTCTATGCATCGGAGATAGTGGTTGCTATCGAGTACCTTCACATGATGGGGATCGTTTACCGTGATCTGAAGCCGGAAAATGTGCTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCTTTGAAGTGTGAGGATTCAACGGCGACCCCACAGGTTATCACTGCTAAAAATCCGACAAATGGCGCTGCCCCACAAAAGGACTACCAGATCGACGCCCCTCCTTTCACATCTTCCTCCTGCATACTTCCAAATTGCATAGTCCCCGCCGTGTCATGTTTCAACCCAAAACGCAGGCGCAAGAAGAAGTCCAGCCAGCGGAATGGACCCGAGTTTGTCGCCGAACCGGTTGATGTGCGGTCGATGTCGTTTGTCGGCACCCACGAATACTTGGCGCCGGAGATTGTCTCCGGCGAGGGCCATGGGAGTGCAGTGGACTGGTGGACTCTAGGGGTGTTTGTGTTTGAATTGTTTTATGGGGTGACACCCTTTAGAGGCGTGGACAATGAGCTCACCTTGGCCAATATAGTAGCCAGAGCCCTCGAGTTCCCCAAAGAACCGGTGGTGCCGACGGCAGCAAAGGACCTCATCTCCCAGTTACTGGTCAAAGATCCGGCGAGGCGGCTTGGGTCGACGACCGGGTCTTCGGCGATCAAGCACCATTCATTTTTCCAAGGGGTGAATTGGGCATTATTGAGATGTACGTCGCCACCATTTATTCCTCCACCATTTAGTAGAGAAGTTGCATCAAATGAAAGCTGCCGCCCAGAGGCCCCAGTGGAGTATTATTAG | 1368 | 56.36 | MESSPDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSAHIVASLPSLLNKPHAPSSDPCFSAINRIRSESASRQLAFSDLKFSHRLGSGDIGSVYLAGLKCAGADGCMFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPTLYASIDSQKWLCLLTEFCPGGDLHVLRQRQPSKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVITAKNPTNGAAPQKDYQIDAPPFTSSSCILPNCIVPAVSCFNPKRRRKKKSSQRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGVDNELTLANIVARALEFPKEPVVPTAAKDLISQLLVKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSREVASNESCRPEAPVEYY | 455 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1980006 | 1985492 | - | MC02g0209 | Mch2g0265 | 681187 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0265 | 455 | Gene3D | Transferase(Phosphotransferase) domain 1 | 170 | 240 | - | - | |
Mch2g0265 | 455 | SUPERFAMILY | Protein kinase-like (PK-like) | 65 | 442 | IPR011009 | - | |
Mch2g0265 | 455 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Mch2g0265 | 455 | FunFam | serine/threonine-protein kinase D6PK-like | 311 | 434 | - | - | |
Mch2g0265 | 455 | Gene3D | Transferase(Phosphotransferase) domain 1 | 312 | 434 | - | - | |
Mch2g0265 | 455 | SMART | serkin_6 | 83 | 416 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0265 | 455 | Pfam | Protein kinase domain | 85 | 247 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0265 | 455 | Pfam | Protein kinase domain | 313 | 416 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0265 | 455 | Gene3D | Phosphorylase Kinase; domain 1 | 82 | 169 | - | - | |
Mch2g0265 | 455 | PANTHER | FLIPPASE KINASE 1-RELATED | 25 | 437 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Mch2g0265 | 455 | MobiDBLite | consensus disorder prediction | 9 | 34 | - | - | |
Mch2g0265 | 455 | ProSiteProfiles | Protein kinase domain profile. | 83 | 416 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch2g0265 | 455 | FunFam | serine/threonine-protein kinase D6PK-like | 170 | 237 | - | - | |
Mch2g0265 | 455 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 207 | 219 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch2g0265 | 455 | FunFam | serine/threonine-protein kinase D6PKL2 | 82 | 169 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0265 | Mch-Chr2:1980006 | Mch5g0012 | Mch-Chr5:79991 | 8.55E-130 | dispersed | |
Mch2g0265 | Mch-Chr2:1980006 | Mch2g0266 | Mch-Chr2:2006236 | 4.43E-129 | tandem | |
Mch9g1070 | Mch-Chr9:9970923 | Mch2g0265 | Mch-Chr2:1980006 | 4.51E-68 | transposed | |
Mch1g0907 | Mch-Chr1:12399390 | Mch2g0265 | Mch-Chr2:1980006 | 7.32E-120 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77186 | PF00069 | Pkinase | 5.60E-35 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g0265 | K08286 | - | csv:101207262 | 800.045 |