Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0265 ATGGAGTCTTCTCCCGACGACATCGCCGACGACCTTCAGAGCCTCAGCTTCAACTCCACCAACACCAACCGCAGCACCAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCGCTCACATCGTCGCTTCCCTCCCTTCCCTTCTCAACAAGCCTCACGCGCCGTCCTCCGACCCTTGCTTCTCCGCCATCAACCGGATCCGATCCGAATCGGCCTCTCGCCAACTCGCCTTCTCCGACCTCAAATTCTCGCACCGCCTCGGCTCCGGCGACATTGGCTCCGTCTACCTCGCCGGGCTGAAGTGCGCCGGAGCCGACGGATGCATGTTCGCCGCGAAGGTAATGGATAAGAAGGAACTGGCGAGCCGGAGTAAGGAAGGGCGGGCGAGGACGGAGAGGGAAATACTGGAGTCGTTGGACCATCCGTTTCTCCCGACGCTATACGCGAGCATCGACTCGCAGAAGTGGCTCTGCCTCTTGACCGAGTTCTGTCCCGGCGGCGACCTCCACGTGCTACGGCAACGACAGCCGAGCAAACGCTTCGATGAACTCGCCGTAAGATTCTATGCATCGGAGATAGTGGTTGCTATCGAGTACCTTCACATGATGGGGATCGTTTACCGTGATCTGAAGCCGGAAAATGTGCTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCTTTGAAGTGTGAGGATTCAACGGCGACCCCACAGGTTATCACTGCTAAAAATCCGACAAATGGCGCTGCCCCACAAAAGGACTACCAGATCGACGCCCCTCCTTTCACATCTTCCTCCTGCATACTTCCAAATTGCATAGTCCCCGCCGTGTCATGTTTCAACCCAAAACGCAGGCGCAAGAAGAAGTCCAGCCAGCGGAATGGACCCGAGTTTGTCGCCGAACCGGTTGATGTGCGGTCGATGTCGTTTGTCGGCACCCACGAATACTTGGCGCCGGAGATTGTCTCCGGCGAGGGCCATGGGAGTGCAGTGGACTGGTGGACTCTAGGGGTGTTTGTGTTTGAATTGTTTTATGGGGTGACACCCTTTAGAGGCGTGGACAATGAGCTCACCTTGGCCAATATAGTAGCCAGAGCCCTCGAGTTCCCCAAAGAACCGGTGGTGCCGACGGCAGCAAAGGACCTCATCTCCCAGTTACTGGTCAAAGATCCGGCGAGGCGGCTTGGGTCGACGACCGGGTCTTCGGCGATCAAGCACCATTCATTTTTCCAAGGGGTGAATTGGGCATTATTGAGATGTACGTCGCCACCATTTATTCCTCCACCATTTAGTAGAGAAGTTGCATCAAATGAAAGCTGCCGCCCAGAGGCCCCAGTGGAGTATTATTAG 1368 56.36 MESSPDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSAHIVASLPSLLNKPHAPSSDPCFSAINRIRSESASRQLAFSDLKFSHRLGSGDIGSVYLAGLKCAGADGCMFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPTLYASIDSQKWLCLLTEFCPGGDLHVLRQRQPSKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVITAKNPTNGAAPQKDYQIDAPPFTSSSCILPNCIVPAVSCFNPKRRRKKKSSQRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGVDNELTLANIVARALEFPKEPVVPTAAKDLISQLLVKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSREVASNESCRPEAPVEYY 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1980006 1985492 - MC02g0209 Mch2g0265 681187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0265 455 Gene3D Transferase(Phosphotransferase) domain 1 170 240 - -
Mch2g0265 455 SUPERFAMILY Protein kinase-like (PK-like) 65 442 IPR011009 -
Mch2g0265 455 MobiDBLite consensus disorder prediction 1 34 - -
Mch2g0265 455 FunFam serine/threonine-protein kinase D6PK-like 311 434 - -
Mch2g0265 455 Gene3D Transferase(Phosphotransferase) domain 1 312 434 - -
Mch2g0265 455 SMART serkin_6 83 416 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0265 455 Pfam Protein kinase domain 85 247 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0265 455 Pfam Protein kinase domain 313 416 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0265 455 Gene3D Phosphorylase Kinase; domain 1 82 169 - -
Mch2g0265 455 PANTHER FLIPPASE KINASE 1-RELATED 25 437 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch2g0265 455 MobiDBLite consensus disorder prediction 9 34 - -
Mch2g0265 455 ProSiteProfiles Protein kinase domain profile. 83 416 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0265 455 FunFam serine/threonine-protein kinase D6PK-like 170 237 - -
Mch2g0265 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0265 455 FunFam serine/threonine-protein kinase D6PKL2 82 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0265 Mch-Chr2:1980006 Mch5g0012 Mch-Chr5:79991 8.55E-130 dispersed
Mch2g0265 Mch-Chr2:1980006 Mch2g0266 Mch-Chr2:2006236 4.43E-129 tandem
Mch9g1070 Mch-Chr9:9970923 Mch2g0265 Mch-Chr2:1980006 4.51E-68 transposed
Mch1g0907 Mch-Chr1:12399390 Mch2g0265 Mch-Chr2:1980006 7.32E-120 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77186 PF00069 Pkinase 5.60E-35 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0265 K08286 - csv:101207262 800.045