Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0266 ATGACTACATTAGCCAGCACTTCTGAAATTGTTGAATCAACCGAAGAATTTGATTCTGGGAAAGCTGGGACGAGCTACACGCTAGATACAGGAAAAAGGTTTTCCATAGAGGATGACATTAATCGTCTATTTCAGGCAATTGATATCAGGACGTTACGTAAGAGGTCAGGCCAGCAACGTGAAGTTGATAAAGATGCCTTGCGAAAGAGTGCGATGAAAAGACCAGTCAGAGTAGGTCCATCTCACATGTCAGGGATTGGAATTTCTGAACCTGCCAGTTTAAAGCAGGCTTTGAGAGGCTTATGCATATCTCAGGCAGCAGAAATGGCTGCTACAAAGAGGTTAACGAGGTCTGCAGGTTCACCCAGAATCTCTGAAGCAGGAACTATCAAAAGATTGTACAGGGCTGTGGTGATTGAGGCCAATGGATCTGGTGCGTCTGTAAATGAAAACAAAGCAAATTTGGTAGAAATATCCATTGTTTCAGAAAGAATTATGTCAACTTTTCAAAATAAGATACCTGAATTGTTGCATAAAACTGAGGCAAATATATCAAACCAAGGAGCTGAGTCTTCATCTCTTACGGACACTGGGGTGTCAGAGGAGGCAAATGTGGATAGATCGATGTCAAATGATCTTGTAGTTGGTACAGCTTCGGAAGTGAAAAGTATAAAGCCACCTGAAGAGGTGGGAAAACTTGAATCTCCTTCCTTTACTCCTTCTAGTGAGAAGAATCTGGCTGTGAATGGCATGGCTAGTTCCTCAACTGAAGATTTGACGAAAAACTCAATGCCAGAGGAGGAGAGAGGTACAATGCGATGTTTATCTTCTCTAACAAGCTCTGGATCTGTTGTTAGGCCAAACAAATCAGCTTTCAATAATACACGTTTCATCAAACCTATTTTCAGGACTAAGAATTTTGTCAAGAAGAAAGCAAAACTTGAACCAAATTCCCCCTCTAGCATGTGTGATATGTGTGCAGGAACGGTTGACACTGATTTGGGTTCCATAGCAGAAAATGCTGAGAACCAGATGTCAGACAATGCACAGCATCATAAGAGTAAAGAAGAAGAGAAAGGTTCTTCCGTCTCTAGTTGCACAACTTTAGGTACTGAAGCAAGTGCATGTGTAGTAAACACAGATTTGTCTAGACGTGGTACATCTCTCAATTGCTGTAACAGGAACAGGCCAACTATAATGGCATCTGATGAGCGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCAAAAAGTAGTATTGGTGAATGTAGCAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTCGTAGTGGAGTTAGGCCTCACATGTCAAAGGACTTGAAATGGGAAGCCATCCACCATCTTCAGGATGAACATAAATGCCTTGGTCTGAGAAACTTCAAGCTGCTAAGGAGGCTTGGTCTTGGGGACATTGGAACTGTGTATCTCTCTGAGCTATGCGAGACAAATTGTCTGTTTGCAATTAAAGTCATGGACAAGGAGTTCTTGGCAAGCAGGAAAAAAGTACTTCGGGCACAAACTGAGAGAGAGATACTGCAAATGCTCGACCATCCATTTCTTCCTACATTATACTCTCATTTTGAGACAGATAAGCTCTCATGCTTGGTCATAGACTACTGTCCAGGTGGAGATCTCCATGTGCTGCGACAGAAGCAAACATGCAAGAGTTTCTCTGAGCATGCAGTCAGGTTTTATGTTGCCGAAGTTCTTCTTGCCCTGGAGTACTTACACATGCTAGGAGTTGTTTACCGAGACCTGAAACCCGAAAACGTTCTGGTCCGAGAAGATGGGCACATCATGCTTACAGACTTTGATTTGTCCCTTAGATGTGCTGTTAACCCGATGCTGCTTCAATCATCATCTCCAGTTGTGGAATCCACCAAAAGGACGCTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGTCTCCACCCATCTTGGCAAGTCTCATGCTTCACTCCCAAAGTTCTATCTGCTCCTTGTAAATCCCGGAGAACGAAAACAGATTATCAGGCTAGCCTATTACCACAGCTTGTCGTGGAGCCAACCAGCGCACGTTCCAATTCGTTCGTAGGAACCCATGAATACCTCGCTCCGGAGATTGTCAAGGGTGATGGCCATGGGAGTGCTGTTGATTGGTGGACTTATGGGATTTTCTTGTTTGAGCTACTATATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGACGACACATTAGCGAACATAGTCTCGCAAACTCTCAAGTTCCCCGATAGCCCCATAGTTAGTTTCCATGCAAGAGATCTGATCAGATGTCTGCTAGCAAAGGAGCCCGAAAACCGATTAGGCTCGACGAAAGGGGCTATTGAGATTAAGCAGCATCCGTTTTTTGAAGGCCTCAATTGGGCTCTCATACGTTGTGCAGTTCCACCTGAACTCCCCAAGTTTTTCGACGGTGGAACTGGTGCATTGCCAATGGATTCCGGGGATAACACGAAGCGTAGAGATCACGAGAATATGGAGGCAGACACAGCAACTTTTGACCTGTTTTAG 2577 44.16 MTTLASTSEIVESTEEFDSGKAGTSYTLDTGKRFSIEDDINRLFQAIDIRTLRKRSGQQREVDKDALRKSAMKRPVRVGPSHMSGIGISEPASLKQALRGLCISQAAEMAATKRLTRSAGSPRISEAGTIKRLYRAVVIEANGSGASVNENKANLVEISIVSERIMSTFQNKIPELLHKTEANISNQGAESSSLTDTGVSEEANVDRSMSNDLVVGTASEVKSIKPPEEVGKLESPSFTPSSEKNLAVNGMASSSTEDLTKNSMPEEERGTMRCLSSLTSSGSVVRPNKSAFNNTRFIKPIFRTKNFVKKKAKLEPNSPSSMCDMCAGTVDTDLGSIAENAENQMSDNAQHHKSKEEEKGSSVSSCTTLGTEASACVVNTDLSRRGTSLNCCNRNRPTIMASDERSRSREKGMFSQSSKSSIGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAIHHLQDEHKCLGLRNFKLLRRLGLGDIGTVYLSELCETNCLFAIKVMDKEFLASRKKVLRAQTEREILQMLDHPFLPTLYSHFETDKLSCLVIDYCPGGDLHVLRQKQTCKSFSEHAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCAVNPMLLQSSSPVVESTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVLSAPCKSRRTKTDYQASLLPQLVVEPTSARSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNDDTLANIVSQTLKFPDSPIVSFHARDLIRCLLAKEPENRLGSTKGAIEIKQHPFFEGLNWALIRCAVPPELPKFFDGGTGALPMDSGDNTKRRDHENMEADTATFDLF 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2006236 2011676 + MC02g0210 Mch2g0266 681188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0266 858 MobiDBLite consensus disorder prediction 1 24 - -
Mch2g0266 858 ProSiteProfiles Protein kinase domain profile. 473 805 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0266 858 MobiDBLite consensus disorder prediction 413 445 - -
Mch2g0266 858 Coils Coil 338 358 - -
Mch2g0266 858 PANTHER FLIPPASE KINASE 1-RELATED 329 839 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch2g0266 858 MobiDBLite consensus disorder prediction 346 360 - -
Mch2g0266 858 MobiDBLite consensus disorder prediction 186 268 - -
Mch2g0266 858 MobiDBLite consensus disorder prediction 400 445 - -
Mch2g0266 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0266 858 CDD STKc_phototropin_like 473 823 - -
Mch2g0266 858 SMART serkin_6 473 805 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0266 858 MobiDBLite consensus disorder prediction 346 366 - -
Mch2g0266 858 Pfam Protein kinase domain 702 805 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0266 858 Pfam Protein kinase domain 474 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0266 858 SUPERFAMILY Protein kinase-like (PK-like) 448 822 IPR011009 -
Mch2g0266 858 MobiDBLite consensus disorder prediction 55 72 - -
Mch2g0266 858 FunFam Serine/threonine-protein kinase D6PK-like 471 556 - -
Mch2g0266 858 Gene3D Transferase(Phosphotransferase) domain 1 699 819 - -
Mch2g0266 858 Gene3D Transferase(Phosphotransferase) domain 1 553 621 - -
Mch2g0266 858 FunFam serine/threonine-protein kinase D6PK-like 557 624 - -
Mch2g0266 858 FunFam serine/threonine-protein kinase D6PK-like 700 823 - -
Mch2g0266 858 MobiDBLite consensus disorder prediction 55 84 - -
Mch2g0266 858 MobiDBLite consensus disorder prediction 235 260 - -
Mch2g0266 858 MobiDBLite consensus disorder prediction 186 217 - -
Mch2g0266 858 Gene3D Phosphorylase Kinase; domain 1 471 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0907 Mch-Chr1:12399390 Mch2g0266 Mch-Chr2:2006236 1.64E-230 dispersed
Mch2g0266 Mch-Chr2:2006236 Mch3g0725 Mch-Chr3:11538666 4.68E-175 dispersed
Mch2g0265 Mch-Chr2:1980006 Mch2g0266 Mch-Chr2:2006236 4.43E-129 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77187 PF00069 Pkinase 1.10E-35 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0266 - - - 0.0