Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0282 | ATGACCGTCATCGACATCATCTTCCGTGTCGACGCCATCTGCCAGAAATACGACAAGTATGATGTCGAGAAGCAGCGCGAGCTCAATGCCTATGGAGACGATGTCTTTGCTCGCCTCTTCGCCGCCGTTGAGCTCGAAATCGAAGCCGCTCTCAAGAAATCTGAGACCGCCGCGACTGAGAAGAATAGGGCTTCTGCAGTTGCGATGAACGCCGAGGTACGCCGGAAGAAGGCCCGATTGATGGACGAAGTCCCTAAGCTCCATAAATTGGCCCGCAAGAAGGTTAAAGGGCTTCCGAAAGAAGAGCTTGCGGTGAGAGGCGACCTTGTTCTTGCGCTTGAAGAGAGGATTAAGGCGATACCGGATGGGGCTACCTCAGCAGGCAAACAATCTGGAGGATGGGCATCCTCCTCATCATCTAAAAACATCAAGTTTGATTCATCATCAGATGGAAACTTTGAGAGCGAGTATTTCCAGCAAAGTAAAGAATCGAGTCAGTTTCGGCAGGAGTATGAAATGCGGAAGATGAAACAGGCATGTCTCGATATCATATCTGAAGGATTGGATATGCTGAAAGATCTAGCTCATGAAATGAATGAGGAATTAGACAGGCAAGTTCCATTAATCGACGAGATAGACGCAAAGGTAGACAAGGTGACTAATGAGATTAAAAATACTAATGTTAGACTCAAGGAAACACTCTATGAGGTGAGATCCAGCCAAAACTTTTGCATTGATATTATTCTTCTATGTGTTATTCTTGGAATCGCTTCTTACTTGTAC | 783 | 46.1 | MTVIDIIFRVDAICQKYDKYDVEKQRELNAYGDDVFARLFAAVELEIEAALKKSETAATEKNRASAVAMNAEVRRKKARLMDEVPKLHKLARKKVKGLPKEELAVRGDLVLALEERIKAIPDGATSAGKQSGGWASSSSSKNIKFDSSSDGNFESEYFQQSKESSQFRQEYEMRKMKQACLDIISEGLDMLKDLAHEMNEELDRQVPLIDEIDAKVDKVTNEIKNTNVRLKETLYEVRSSQNFCIDIILLCVILGIASYLY | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2113563 | 2115203 | + | MC02g0225 | Mch2g0282 | 681204 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0282 | 261 | Pfam | SNARE domain | 208 | 257 | IPR000727 | - | |
Mch2g0282 | 261 | Coils | Coil | 209 | 229 | - | - | |
Mch2g0282 | 261 | MobiDBLite | consensus disorder prediction | 124 | 149 | - | - | |
Mch2g0282 | 261 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 171 | 233 | IPR000727 | - | |
Mch2g0282 | 261 | MobiDBLite | consensus disorder prediction | 129 | 149 | - | - | |
Mch2g0282 | 261 | CDD | SNARE_Qc | 181 | 232 | - | - | |
Mch2g0282 | 261 | PANTHER | SYNTAXIN | 48 | 251 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Mch2g0282 | 261 | SUPERFAMILY | SNARE fusion complex | 178 | 231 | - | - | |
Mch2g0282 | 261 | Gene3D | - | 170 | 232 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0282 | Mch-Chr2:2113563 | Mch5g1759 | Mch-Chr5:18170087 | 4.42E-117 | dispersed | |
Mch2g0282 | Mch-Chr2:2113563 | Mch2g0362 | Mch-Chr2:2702939 | 7.31E-171 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g0282 | K08506 | - | csv:101211289 | 423.32 |