Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0341 ATGGAGTATATTTTGGACGGGAGTGCTTTTGTCAAAGATGATAAAAAATTACATGAAATGGACCCTCTTCAAAAGCCGAAGCAAGATCGTTATGCTCTTCGAACTTCTCCTCAATGGCTAGGCCCTCAAATTGAAATCATCCGACATTCAACAAAGTCAATTGAAAGAGAGATCAACTCAGTGAACGACAATCCACTTATTGATGTTTCGAGGAACAAAGCCTTACACGGTGGCAATTTTCAAGGAACTCCAATTGGGGTGTCCATGGACAACACAAGACTAGCCATAGCCTCAATTGGGAAGCTCATGTTTGCTCAATTCTCCGAACTAGTCAACGATTTCTATAACAATGGCCTACCTTCGAACCTCTCTGCTGGAAGCAACCCAAGCTTAGACTATGGATTTAAAGGAGCCGAAATCGCCATGGCTGCCTATTGCTCAGAGCTGCAATTCTTAGCAAATCCCGTCACCAACCATGTCCAAAGTGCGGAGCAACACAACCAAGACGTGAACTCATTGGGTCTAATTTCTTCAAGAAAAACAGCTGAGGCAGTAGAAATCTTGAAGCTGATGAGCACAACCTTCCTAGTTGGTCTCTGCCAAGCCATAGATTTGAGACACATGGAAGAGAATCTGAAGAGCACTGTGAAAAACACAGTGAGTCAAGTGGCCAAGAAGGTTCTAACCATTGGAGTAAACGGAGAGCTCCATCCTTCAAGATTCTGTGAGAAAGATTTGCTCAAAGTCATTGATCGGGAGCATGTTTTTGCCTACATTGACGACGCGTGTAGCATGACATATCCTTTAATGCAAAAGCTGAGGCAAGTTCTGGTTGAACATGCTCTGAACAACCATGAAGATTTGAAGAATTCAAAATCTTCAATCTTTCTAAAGATTGGAGCTTTTGAGGAAGAGCTAAAGACCCTTTTGCCCAAAGAGGTAGAAAGTGGAAGACAAGCCCTTGGAAGAGGCAAAGCAGCAATTTGCAACAAGATCAAAGAATGTAGATCTTATCCACTATACAGATTTGTAAGAGAAGATTTGGGAACTTCTATTTTGACAGGGGAGAAGGTGAAATCCCCTGGGGAAGAATTTGACAAAGTTTTTACAGCAATTTGTGAGGGGAAAATCATTGATCCTCTGCTTGAATGCCTTGAATGTTGGGATGGGACTCCTCTTCCTGTAAATTAG 1191 42.32 MEYILDGSAFVKDDKKLHEMDPLQKPKQDRYALRTSPQWLGPQIEIIRHSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSAGSNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSTTFLVGLCQAIDLRHMEENLKSTVKNTVSQVAKKVLTIGVNGELHPSRFCEKDLLKVIDREHVFAYIDDACSMTYPLMQKLRQVLVEHALNNHEDLKNSKSSIFLKIGAFEEELKTLLPKEVESGRQALGRGKAAICNKIKECRSYPLYRFVREDLGTSILTGEKVKSPGEEFDKVFTAICEGKIIDPLLECLECWDGTPLPVN 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2518239 2522298 - MC02g_new0063 Mch2g0341 681263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0341 396 NCBIfam phenylalanine ammonia-lyase 1 386 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Mch2g0341 396 Gene3D Fumarase/aspartase (Central domain) 1 390 - -
Mch2g0341 396 Gene3D - 209 330 IPR023144 -
Mch2g0341 396 PANTHER HISTIDINE AMMONIA-LYASE 1 395 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Mch2g0341 396 Pfam Aromatic amino acid lyase 3 222 IPR001106 -
Mch2g0341 396 SUPERFAMILY L-aspartase-like 1 395 IPR008948 GO:0003824(InterPro)
Mch2g0341 396 FunFam Phenylalanine ammonia-lyase 209 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0341 Mch-Chr2:2518239 Mch6g0950 Mch-Chr6:6730339 4.24E-169 dispersed
Mch1g0817 Mch-Chr1:11724681 Mch2g0341 Mch-Chr2:2518239 2.16E-233 wgd
Mch2g0341 Mch-Chr2:2518239 Mch9g1792 Mch-Chr9:19796163 3.14E-237 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0341 K10775 - csv:101218156 735.332