Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0356 ATGGGGAAGGACGTTGAGGTCGCCGAGCAAGGGGAGTTCCAAGCCAAGGACTACCAAGACCCTCCACCGGCCCCTCTCATCGACGCCGAGGAGCTCACCAAATGGTCCCTCTACCGGGCCGTAATCGCCGAGTTCATCGCCACTCTCCTCTTCCTCTACGTCACCGTTTTGACCGTCATCGGCTACTCCCACCAGAGCGACCTTTCCATACCCTCCAACACCGACCCTTGCAGCGGCGTTGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCATGATTTTCATCCTCGTCTACTGCACCGCCGGCATCTCCGGTGGCCACATCAACCCAGCCGTCACCTTCGGCCTCTTCCTCGCCCGTAAGGTGTCGCTGGTTCGGGCCTTGCTCTACATAATTGCGCAGTGCCTGGGCGCCATCTGCGGGTGCGGCCTCGTCAAGGCTTTCCAGTCCGCCTTCTACGTCAGGTACAAAGGCGGGGCCAACATGCTCGCCGATGGCTACAACAAGGGCACTGGACTCGGCGCTGAGATCATCGGTACCTTCGTCCTTGTCTACACTGTCTTCTCTGCCACCGATCCCAAGAGAAGCGCCAGAGATTCCCACGTTCCTGTTTTGGCTCCACTGCCAATTGGGTTTGCGGTGTTCATGGTTCACTTGGCCACAATTCCCATCACCGGGACTGGAATTAACCCCGCAAGAAGTTTCGGCGCTGCTGTCATATACAACCAGGATAAGGCCTGGGACGACCAATGGATGTTCTGGGTTGGCCCATTTGTTGGAGCTGCAATTGCTGCATTGTACCACCAGTATGTGCTCAGAGCTGGAGCCATTAAAGCCCTCGGATCCTTCAGGAGCAACGCTTGA 864 58.1 MGKDVEVAEQGEFQAKDYQDPPPAPLIDAEELTKWSLYRAVIAEFIATLLFLYVTVLTVIGYSHQSDLSIPSNTDPCSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGCGLVKAFQSAFYVRYKGGANMLADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNQDKAWDDQWMFWVGPFVGAAIAALYHQYVLRAGAIKALGSFRSNA 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2667614 2670134 + MC02g0292 Mch2g0356 681278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0356 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 2 285 IPR034294 GO:0005886(PANTHER)|GO:0015250(PANTHER)
Mch2g0356 287 Gene3D Glycerol uptake facilitator protein. 24 287 IPR023271 -
Mch2g0356 287 Pfam Major intrinsic protein 31 268 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch2g0356 287 FunFam Probable aquaporin PIP1-2 24 287 - -
Mch2g0356 287 NCBIfam MIP family channel protein 43 268 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch2g0356 287 SUPERFAMILY Aquaporin-like 31 273 IPR023271 -
Mch2g0356 287 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch2g0356 287 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch2g0356 287 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch2g0356 287 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch2g0356 287 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch2g0356 287 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch2g0356 287 CDD MIP 39 271 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch2g0356 287 ProSitePatterns MIP family signature. 107 115 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0801 Mch-Chr1:11624180 Mch2g0356 Mch-Chr2:2667614 3.72E-168 dispersed
Mch1g0862 Mch-Chr1:12020213 Mch2g0356 Mch-Chr2:2667614 9.06E-34 dispersed
Mch2g0356 Mch-Chr2:2667614 Mch4g2057 Mch-Chr4:22803334 2.78E-163 dispersed
Mch1g0569 Mch-Chr1:9907377 Mch2g0356 Mch-Chr2:2667614 9.14E-13 transposed
Mch1g0798 Mch-Chr1:11604393 Mch2g0356 Mch-Chr2:2667614 7.69E-148 wgd
Mch2g0356 Mch-Chr2:2667614 Mch5g1752 Mch-Chr5:18123479 7.70E-150 wgd
Mch2g0356 Mch-Chr2:2667614 Mch9g1784 Mch-Chr9:19720111 6.44E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0356 K09872 - csv:101215300 530.406