Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0380 | ATGGAAGGCAGCGACACGATCACCGCCGTTTCATCAACTCCTCTATCTCAATCTCCTTCTCCTTCTCCTTCTTCTTCTTCTCCGCCGTCCGTCATTCTCAGTCCTTGCGCGGCGTGCAAGATTCTGAGGCGGAGATGTGCCGACCGATGTGTATTGGCGCCCTATTTCCCGCCCACCGACCCGGCCAAATTCGCCATCGCTCATCGAGTTTATGGCGCTAGCAATATCATCAAATTCTTGCAGGAATTGCCTGAATCTCAAAGGGCCGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGGATCAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAGCTCCAAAAGCAAGTGAATGAGCTCCAAGCGCAGCTAGCCAAGGCCCAGGCCGAGCTCGTCAATATGCAGTGCCAGCAAGCCAATCTAGTGGCCTTAGTTTGCAGGGAATTTGCTCAGTCTCATCAATCTGTTGATGATTTCAACTCCAACAGCCCTCACAGTGGCTTTCAGAGCATCAACCAGAGCTACTTTGAGGATACCAATGTAAACCCATTGTGGGAGCCTCTCTGGACATCATGA | 588 | 51.87 | MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYFEDTNVNPLWEPLWTS | 195 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2802266 | 2804265 | - | MC02g0313 | Mch2g0380 | 681302 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0380 | 195 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 34 | 164 | - | - | |
Mch2g0380 | 195 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Mch2g0380 | 195 | Coils | Coil | 114 | 141 | - | - | |
Mch2g0380 | 195 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Mch2g0380 | 195 | ProSiteProfiles | LOB domain profile. | 34 | 135 | IPR004883 | - | |
Mch2g0380 | 195 | Pfam | Lateral organ boundaries (LOB) domain | 35 | 132 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0380 | Mch-Chr2:2802266 | Mch3g0514 | Mch-Chr3:9169524 | 4.78E-66 | dispersed | |
Mch2g0380 | Mch-Chr2:2802266 | Mch9g1433 | Mch-Chr9:16724604 | 5.01E-41 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42866 | PF03195 | LOB | 1.30E-40 | No_clan | Mch | TF |
Pathway information
