Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0380 ATGGAAGGCAGCGACACGATCACCGCCGTTTCATCAACTCCTCTATCTCAATCTCCTTCTCCTTCTCCTTCTTCTTCTTCTCCGCCGTCCGTCATTCTCAGTCCTTGCGCGGCGTGCAAGATTCTGAGGCGGAGATGTGCCGACCGATGTGTATTGGCGCCCTATTTCCCGCCCACCGACCCGGCCAAATTCGCCATCGCTCATCGAGTTTATGGCGCTAGCAATATCATCAAATTCTTGCAGGAATTGCCTGAATCTCAAAGGGCCGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGGATCAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAGCTCCAAAAGCAAGTGAATGAGCTCCAAGCGCAGCTAGCCAAGGCCCAGGCCGAGCTCGTCAATATGCAGTGCCAGCAAGCCAATCTAGTGGCCTTAGTTTGCAGGGAATTTGCTCAGTCTCATCAATCTGTTGATGATTTCAACTCCAACAGCCCTCACAGTGGCTTTCAGAGCATCAACCAGAGCTACTTTGAGGATACCAATGTAAACCCATTGTGGGAGCCTCTCTGGACATCATGA 588 51.87 MEGSDTITAVSSTPLSQSPSPSPSSSSPPSVILSPCAACKILRRRCADRCVLAPYFPPTDPAKFAIAHRVYGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQCQQANLVALVCREFAQSHQSVDDFNSNSPHSGFQSINQSYFEDTNVNPLWEPLWTS 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2802266 2804265 - MC02g0313 Mch2g0380 681302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0380 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 164 - -
Mch2g0380 195 MobiDBLite consensus disorder prediction 1 31 - -
Mch2g0380 195 Coils Coil 114 141 - -
Mch2g0380 195 MobiDBLite consensus disorder prediction 1 20 - -
Mch2g0380 195 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
Mch2g0380 195 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0380 Mch-Chr2:2802266 Mch3g0514 Mch-Chr3:9169524 4.78E-66 dispersed
Mch2g0380 Mch-Chr2:2802266 Mch9g1433 Mch-Chr9:16724604 5.01E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42866 PF03195 LOB 1.30E-40 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0380 - - - 0.0