Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0384 ATGTTCTCAGAGTTGATGAACTTTCTGAGATCTTGTTTTCGACCAAGGTCGAATCGACATGTGCACAAAGGTTCAGATGCTGGGGGTCGCCAGGATGGTCTGTTGTGGTACAAAGACAGTGGGCAGCACGCCAATGGTGAGTTTTCAATGGCGGTAGTTCAGGCTAACAATTTACTTGAGGATCAAAGCCAGATGGAGTCGGGCAATTTGAGCTTGCACGAGTCCGGCCCGTATGGTACCTTTGTTGGTGTATATGATGGGCATGGAGGGCCCGAGATGTCTCGCTATGTGAATGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAGTCCATGTCAGTGGATGTCATACGAAAGGCATTTCAAGCTACCGAAGAGGGGGTTATCGCTCAAGTTTCAAGAGAATGGTCAATGAGGCCACAAATCGCAGCTGTTGGATCTTGCTGCCTTGTTGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACGCAGGTGATTCCCGTGCTGTTTTAGGGAGAGTCGTAAAGGCGACAGGGGAAGTTTTATCCGTTCAGTTATCGACTGAGCACAATGCAGCTATAGAGTCTGTGAGGCAAGAGCTTCGTGCCCTGCATCCCGATGACTCTCATATTGTAGTTTTGAAGCATAATGTATGGCGTGTGAAGGGCCTTATACAGGTTTCTCGATCTATTGGTGATGTCTATTTAAAGAAAGCTGAGTTCAACCGAGAGCCTCTTTATGCTAAGTTCCGCCTTCGTGAACCTATCAAAAAGCCCATACTGAGCGCGGAACCGTCTATTTCAGTGTTGCAATTGCAGCCACAGGATCAGTTCATTATATTTGCTTCAGATGGCCTCTGGGAACACCTTAGCAATCAGGAGGCTGTCGACATTGTCCAAAACCATCCGCGTAGTGGAAGTGCAAGGAGGCTGGTGAAAGCAGCACTGCAAGAGGCAGCCAAGAAGAGAGAAATGAGGTACTCCGATTTGAAGAAGATTGACCGCGGCGTAAGGCGACACTTCCACGATGACATCACAGTGGTTGTCGTGTTTCTCGACTCGAACCTTGTGAGCCGGGCTAGCTCTACAAAATGCACAAGCCTATCCGTGCGAGGGGGCGGAGTCAACTTGCCTCCAAACACACTGGCCCCTTGCACCACACCATCAGAGACTGGCATGGCCTGA 1194 48.83 MFSELMNFLRSCFRPRSNRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHESGPYGTFVGVYDGHGGPEMSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGVIAQVSREWSMRPQIAAVGSCCLVGVICGGTLYIANAGDSRAVLGRVVKATGEVLSVQLSTEHNAAIESVRQELRALHPDDSHIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPIKKPILSAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSTKCTSLSVRGGGVNLPPNTLAPCTTPSETGMA 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2843424 2847492 + MC02g0317 Mch2g0384 681306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0384 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Mch2g0384 397 SMART PP2C_4 39 353 IPR001932 -
Mch2g0384 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Mch2g0384 397 CDD PP2Cc 48 355 IPR001932 -
Mch2g0384 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
Mch2g0384 397 FunFam Phosphatase 2C family protein 36 365 - -
Mch2g0384 397 Gene3D - 35 367 IPR036457 -
Mch2g0384 397 Pfam Protein phosphatase 2C 75 323 IPR001932 -
Mch2g0384 397 PANTHER PROTEIN PHOSPHATASE 39 354 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1790 Mch-Chr10:17651719 Mch2g0384 Mch-Chr2:2843424 1.96E-210 dispersed
Mch2g0384 Mch-Chr2:2843424 Mch9g1618 Mch-Chr9:18342636 1.73E-175 dispersed
Mch4g0769 Mch-Chr4:5272803 Mch2g0384 Mch-Chr2:2843424 1.59E-136 transposed
Mch5g1439 Mch-Chr5:15484369 Mch2g0384 Mch-Chr2:2843424 1.86E-145 transposed
Mch1g1618 Mch-Chr1:17234809 Mch2g0384 Mch-Chr2:2843424 2.43E-230 wgd
Mch2g0384 Mch-Chr2:2843424 Mch4g0471 Mch-Chr4:3011548 7.39E-214 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0384 - - - 0.0