Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0453 | ATGGATCGGCTCGGGAGTAACGACAACAAACAAAGCGTTGAAAGGCATTCCCATGTCGAGATGGGATCATTAGGCGAGAAAACCATACTGGAATTTGAGGATGAGAGCCTCGTTAGTCCTGTATCATTAAATAGAAAGAATTTTGCTTTTGAGGCATCTATGCACGGTTCTCCATCATCTGGTGATTCGCAGAAATTTTGTTATGGTAACATGAAGAACAGAATTATTGACAGCATTAAGATTGTTGTCTTCTCTGCTAAAATCAATCTTCTCATGCCTTTCGGCCCTTTAGCAATATTAGTCAGCAGTCTTTCTGGTCACCATGGGTGGGTCTTCCTTTTAAGCTTACTGGGGATCATACCTCTTGCTGAGCGTCTGGGTTATGCAACGGAACAACTGGCATGCTATACTGGAGCCACAGTTGGAGGTCTTCTGAATGCTACTTTTGGAAATGCCACAGAATTGATAATATCAATATATGCATTGCGAAGTGGAATGATACGTGTCGTTCAACAGTCATTATTAGGTTCAATTTTGTCAAATATGTTATTAGTACTTGGATGTGCCTTCTTTGCTGGTGGAGTTGTGGTTTCTAAGAGGGAGCAGGTCTTCAGTAAGGGATCTGCTACAGTGAATTCTGGATTGCTGTTGATGGCAGTAATGGGACTTCTATTTCCTGCTGTCCTGCATTCCACACATACAGAGTTGCACTTTGGAAAGTCAGAGTTGGCTCTTTCAAGATTTAGTAGCGGCATTATGTTGGTGGCATATGCTGCCTATCTTGTTTTTCAGTTGAAAAGCGAAAAGAACTTATATCACCCGGTTGATGTGGTCGATGAGGTGGAGACTGAAGAGAATTCTGATGATGAAGAATCTCCTGAGATATCTATGTGGGAATCCATTATTTGGCTGTCTATCTTGACCATTTGGATATCCGTCCTTTCTGAATATTTAGTAAATGCAATAGAGGGGGCATCGGTTGCCATGGACATACCAGTAGCATTCATTAGTGTAATCCTACTACCAATTGTTGGGAATGCTGCAGAGCATGCGGGTGCCATCATGTTTGCCATGAAAGACAAGCTTGACATTTCTTTGGGAGTCGCAATAGGATCATCTACGCAGATATCTATGTTCGGGATTCCTTTTTGTGTGGTCATTGGTTGGATGATGGGAGTCCCTATGGACTTGAATTTTCAACTCTTCGAGACCGCCACGCTTTTCATCACTGTTATAGTTGTCGCCTTCATGTTGCAGGATGGAACTTCTAATTACCTCAAAGGACTGATGCTTATTCTCTGCTACCTGATAGTAGCTGCAAGTTTCTTTGTACATATTGATCCAGCTTCAGTTGAAGATAAAAAATCCGGTGCATGA | 1377 | 42.05 | MDRLGSNDNKQSVERHSHVEMGSLGEKTILEFEDESLVSPVSLNRKNFAFEASMHGSPSSGDSQKFCYGNMKNRIIDSIKIVVFSAKINLLMPFGPLAILVSSLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRSGMIRVVQQSLLGSILSNMLLVLGCAFFAGGVVVSKREQVFSKGSATVNSGLLLMAVMGLLFPAVLHSTHTELHFGKSELALSRFSSGIMLVAYAAYLVFQLKSEKNLYHPVDVVDEVETEENSDDEESPEISMWESIIWLSILTIWISVLSEYLVNAIEGASVAMDIPVAFISVILLPIVGNAAEHAGAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWMMGVPMDLNFQLFETATLFITVIVVAFMLQDGTSNYLKGLMLILCYLIVAASFFVHIDPASVEDKKSGA | 458 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3304559 | 3311121 | - | MC02g0379 | Mch2g0453 | 681375 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0453 | 458 | Gene3D | - | 138 | 280 | IPR044880 | - | |
Mch2g0453 | 458 | Gene3D | - | 287 | 444 | IPR044880 | - | |
Mch2g0453 | 458 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 53 | 448 | IPR004713 | GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER) | |
Mch2g0453 | 458 | Pfam | Sodium/calcium exchanger protein | 109 | 265 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0453 | 458 | Pfam | Sodium/calcium exchanger protein | 300 | 442 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch2g0453 | 458 | FunFam | Vacuolar cation/proton exchanger | 139 | 278 | - | - | |
Mch2g0453 | 458 | FunFam | Vacuolar cation/proton exchanger | 288 | 444 | - | - | |
Mch2g0453 | 458 | NCBIfam | calcium/proton exchanger | 92 | 443 | IPR004798 | GO:0006816(InterPro)|GO:0015369(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1417 | Mch-Chr10:13332115 | Mch2g0453 | Mch-Chr2:3304559 | 7.70E-208 | dispersed | |
Mch2g0453 | Mch-Chr2:3304559 | Mch8g1017 | Mch-Chr8:7198468 | 2.12E-196 | dispersed | |
Mch2g0453 | Mch-Chr2:3304559 | Mch1g0613 | Mch-Chr1:10320444 | 2.86E-110 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g0453 | K07300 | - | csv:101215915 | 762.681 |