Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0458 | ATGGGCCTCTCCAGCCTTCCTGCCCCGTCTGAAGGTGTACTGGGTGTGATCCTTGTAAATACAGCCCTATCAATTTCCATCTTCAAAGGTTTAGTTCGATCGATTCTCCATGTTGTTGGCATCCATCTCTCGTCGCCTACATCGTCAGCAGACTCCATGGAGAATGCTCCTGAATCTGTAGAGTTCCGTCTTAACCCGAATGGAAGTTACATTGAAGAGTTCCGCAGCCGGATCCCAGCAATTCTGTACGACAAAGTTCACAGCTGCAAATGGCTAGAACAGGACTGCTCAGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTTTTCCACAGAGTGTGCTTGGAGAAGTGGCTGGACTACTGGAACCTTACGTGCCCACTGTGCCGGACTCCATTAATGCCCGAAGAAGAGACAGCTTCCTGCTTCTGG | 456 | 49.12 | MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW | 152 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3340651 | 3341106 | + | MC02g0384 | Mch2g0458 | 681380 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0458 | 152 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 143 | IPR013083 | - | |
Mch2g0458 | 152 | SMART | ring_2 | 96 | 137 | IPR001841 | - | |
Mch2g0458 | 152 | PANTHER | - | 1 | 152 | IPR044249 | - | |
Mch2g0458 | 152 | SUPERFAMILY | RING/U-box | 84 | 144 | - | - | |
Mch2g0458 | 152 | Pfam | Ring finger domain | 95 | 138 | IPR001841 | - | |
Mch2g0458 | 152 | ProSiteProfiles | Zinc finger RING-type profile. | 96 | 138 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0458 | Mch-Chr2:3340651 | Mch7g0647 | Mch-Chr7:11130262 | 2.07E-15 | dispersed | |
Mch2g0458 | Mch-Chr2:3340651 | Mch4g0358 | Mch-Chr4:2246652 | 1.02E-69 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g0458 | K16285 | - | csv:101216645 | 298.13 |