Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0480 ATGCAAGCTTCACAGCTTCATAGAGGTTCACATATGTCAAAGAGACTATGTTATCAGCCACTGCAAGGAGTGGATGCCTACTGTTTCTCCCAATTCCAAACTTTGGGTCGCCAACTATATTCCACTGGTGGCAACCAAAGAGGTGAGTTCAATGTTCAAGACATCGGTGATCGGTACTGCACTCTGGAGTCGTCATCAGGAAGCCATTGCTATACAGCTCACAACTCGACGTCGACCATCACCTTCTCACCCAACGGGAGTCCGGTATCGCAACAAGATTCTCGTTCAAATCCTTCGGATCAAAATAATTCTCCTGACAATACATATGGCTCCCCAGTAAGCGGATCCAGTATAACAGATGATATTAGTGACTTTACGCACAAACTACGGGAGTTGGAATCTGTGATGCTTGGCCCTGATTCTGATGTCATTGACAGTTTTGATAGTATCTACCAGGAGGGAACAGACAATCCAGAGATGGGAAGTTGGGGACAAGTGATGGATGCTATCACTAAAGGAAACTTGAAAAAGATTCTAATAGTTTGTGCTAAAGCGGTATCGGATAATGATGCGTTAATGGCACAATGGCTCATGGATGAATTGCGCAAGATGGTGTCGGTTCGCGGTGAACCGATACAGAGGTTGGGAGCATATATGCTGGAGGGGCTGGTTGCACGGCTGGCTTCCTCAGGGAGCTGCATCTATAAAGCTTTGAGATGCAAGGAACCAGCAAGTGCGGAGCTCCTCTCTTATATGCACGTTCTTTACGAGGTCTGCCCATATTTCAAATTCGGGTACATGTCTGCAAATGGTGCCATTGCAGAAGCCATGAAGGATGAAGATAGAGTTCACATCATTGATTTCCAAATTTCTCAGGGTACCCAGTGGATCACTTTGATTCAAGCTTTTGCAGGCAGGCCTGGTGGACCACCTCACATTCGTATAACGGGTATAGATGATCCCGCATCAGCTTATGCCCGCGGAGGCGGGCTAGATATTGTTGGGAAGAGGCTTTCCAGGTTAGCAAAATCGTGTAATGTGCCATTTGAGTTTCATTCGGCTGCCCTTTCTGGCTGCAATGTTCAGCTAAAAAATCTTGGCATTCGACGAGGGGAGGCTTTAGCAGTGAATTTTGCATTCATGCTCCACCATATGCCAGATGAGAGCGTAAGCACCGAAAATCATCGAGATAGGCTGTTGAGGATGGTCAAGGGTCTGTCTCCAAGGGTAGTGACCCTTGTCGAGCAAGAATCCAACACAAACACTGCTGCATTCTTTCCCCGGTTCATCGAGACGCTGGATTACTACAACGCCATGTTTGAATCAATCGACGTTACTCTTCCACGACAGCACAAGGAGCGAATCAACATCGAGCAACATTGTCTAGCCAGGGAAGTTGTCAACATTTTAGCCTGTGAAGGAGCCGAGAGAGTGGAACGACACGAGCTACTCGGGAAGTGGAGACTGCGATTCGCAATGGCAGGATTCACTCCTTACCCATTAAGCTCTTTGGTGAACGCTACAATAAAAACATTATTAGATAGCTATTGTAAGAGGTATAGGCTTGAAGAGAGAGAAGGGGCTCTGTATTTAGGCTGGATGAACAGGGATTTGGTTGCTTCTTGTGCCTGGAAGTGA 1638 46.76 MQASQLHRGSHMSKRLCYQPLQGVDAYCFSQFQTLGRQLYSTGGNQRGEFNVQDIGDRYCTLESSSGSHCYTAHNSTSTITFSPNGSPVSQQDSRSNPSDQNNSPDNTYGSPVSGSSITDDISDFTHKLRELESVMLGPDSDVIDSFDSIYQEGTDNPEMGSWGQVMDAITKGNLKKILIVCAKAVSDNDALMAQWLMDELRKMVSVRGEPIQRLGAYMLEGLVARLASSGSCIYKALRCKEPASAELLSYMHVLYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGTQWITLIQAFAGRPGGPPHIRITGIDDPASAYARGGGLDIVGKRLSRLAKSCNVPFEFHSAALSGCNVQLKNLGIRRGEALAVNFAFMLHHMPDESVSTENHRDRLLRMVKGLSPRVVTLVEQESNTNTAAFFPRFIETLDYYNAMFESIDVTLPRQHKERINIEQHCLAREVVNILACEGAERVERHELLGKWRLRFAMAGFTPYPLSSLVNATIKTLLDSYCKRYRLEEREGALYLGWMNRDLVASCAWK 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3477411 3480074 + MC02g0405 Mch2g0480 681402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0480 545 MobiDBLite consensus disorder prediction 81 118 - -
Mch2g0480 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Mch2g0480 545 Pfam GRAS domain family 175 545 IPR005202 -
Mch2g0480 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 145 544 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1144 Mch-Chr11:8022143 Mch2g0480 Mch-Chr2:3477411 5.98E-170 dispersed
Mch11g1412 Mch-Chr11:10461550 Mch2g0480 Mch-Chr2:3477411 7.21E-147 dispersed
Mch1g1701 Mch-Chr1:17686047 Mch2g0480 Mch-Chr2:3477411 5.94E-207 dispersed
Mch2g0480 Mch-Chr2:3477411 Mch4g2611 Mch-Chr4:26368287 2.06E-82 dispersed
Mch2g0480 Mch-Chr2:3477411 Mch5g1847 Mch-Chr5:18703155 1.34E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42874 PF03514 GRAS 1.20E-135 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0480 K27748 - csv:101221914 1007.28