Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0481 ATGCCAGCTGAAAATTCAATTCCATTTGATCGAGATGCAGAGCCTTTTGTTGAGGTGGATCCAACTGGAAGGTTTGGACGATATGATGATCTTCTGGGGTCTGGAGCAGTGAAGAAGGTTTATAGGGCATTTGATCAGGAGGAAGGTATAGAGGTTGCTTGGAATCAGGTTCGCTTGAGAAACTTCAGTGGGGATCAAGTGCTCATCAACCGGCTGAGATCTGAGGTTCAGCTGCTGAGCACGTTGAACAACAAATATATCATTGTTTGTTACAGTGTTTGGAATGATGATGAGCGTAACACGTTGAATTTCATTACCGAGGTGTGCACATCAGGAAACCTGAGGGATTATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAGAAGTGGTCAAAGCAGGTACTCGAGGGATTGGATTATCTTCATACTCATGAGCCTTGCATTATTCACAGAGATCTCAATTGTAGTAACATATTTGTCAATGGGAACATTGGCCAGGTTAAAATAGGCGATCTAGGTTTTGCAGCTATAGTTGGCAGGAGCCACGCTGCACATTCAATCATAGGCACACCAGAGTATATGGCACCAGAGCTGTATGAGGAAGATTACACGGAGATGGTGGATATATACTCCTTCGGGATGTGTTTGCTCGAGATGGTTACAATGGAGATACCGTACAGTGAATGTGACAGCGTTGCCAAGATATACAAGAAGGTGACGACCGGAATAAAGCCCCAAGCATTAAACAAAGTGACTGATGATGAAGTCAAAGCTTTCATTGATAAGTGCATTGCACAACCAAGGGCAAGACCTTCCGCCTCTGAACTTCTCAAGGATCCCTTCTTCGACGAAGTCAGGGATGAAGACTCTGAACAGACTTATTAG 891 44.0 MPAENSIPFDRDAEPFVEVDPTGRFGRYDDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSGDQVLINRLRSEVQLLSTLNNKYIIVCYSVWNDDERNTLNFITEVCTSGNLRDYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTTGIKPQALNKVTDDEVKAFIDKCIAQPRARPSASELLKDPFFDEVRDEDSEQTY 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3481067 3485838 + MC02g0406 Mch2g0481 681403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0481 296 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Mch2g0481 296 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Mch2g0481 296 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Mch2g0481 296 SUPERFAMILY Protein kinase-like (PK-like) 19 285 IPR011009 -
Mch2g0481 296 CDD STKc_WNK 24 284 - -
Mch2g0481 296 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 286 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Mch2g0481 296 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0481 296 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0481 296 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1249 Mch-Chr11:8866974 Mch2g0481 Mch-Chr2:3481067 1.75E-160 dispersed
Mch2g0481 Mch-Chr2:3481067 Mch3g1414 Mch-Chr3:16598092 1.13E-120 dispersed
Mch2g0481 Mch-Chr2:3481067 Mch8g2922 Mch-Chr8:31967533 2.93E-110 transposed
Mch2g0481 Mch-Chr2:3481067 Mch7g1064 Mch-Chr7:14680084 1.02E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77194 PF00069 Pkinase 3.20E-52 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0481 K08867 - csv:101222153 585.489