Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0574 ATGGGGAGCTGTTTGTCTACTGGCTATCAGAGTAGTTGCCATGGTGGAAGCAATGGAGAGACAGTTTCTGGGTCCTGCTGTTTGGGAATTGGAGTTGGTGGTCGGATAGCAAGAAAGATAACATTCTCAGATCATATCTTTTCTCTGCAGCATTTGAATTCTATACCAAATAGACTTGTGTTTAATGGAAAGACTCGAAATTCTTGCATTTTCACGCAACAGGGTCGCAAGGGTATAAACCAGGATGCCATGGTTGTGTGGGAAGACTTTATATCCGATGGTGCAGTCTTTTGTGGGATATTTGATGGTCACGGTCCTCACGGTCATGTCGTTGCACGAAAAGTTAGAGACGTTCTACCAAGAAAGCTAGTGTCATTCTGGCAGTCATCTCAGTTGAAGCATAATGGATCAGATAGAAGTTCTTGTTTCGGGTGGGGGCGGGGGAATTCCGCAGATGGTGAAGGGTTGGAGACGGCTGGATCAGAGGAGGATAAATCAAGTTCTTTATGGAGAAGAGCTTTCCTAAAATCATATAAATCCATGGATAAGGAGCTCAAATCTCATCCCAAATTGGACTGTTTCTGTAGTGGTAGTACTGCAGTCACTCTAGTGAAGCAGGGCTCAGATCTATTCGTTGGAAGTATCGGGGATTCTCGAGCAATTCTTGGATCTAAAGACAGTTGTGATTCCCTTGTAGCTACCCAATTGACAGTAGATCTAAAGCCTGATTTGCCCAGAGAAGCCGAAAGGATAAAGAAGTGTAAAGGGAGGGTATTTGCATTGCAAGATGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAATGCGCCAGGATTAGCCATGGCTCGAGCATTTGGCGACTTCTGCTTGAAGGACTATGGAGTTATCTCTATCCCCGAGTTCTCGCATCGCTTGCTTACGGATTATGACCTGTTTATTGTGCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTAGTCGAGATAGTGAATTCCACCTCGACTCGGTCATCTGCAGCCCGAATGGTGGTAGACGCGGCTGCTCGTGAGTGGAAGCTCAAGTACCCAACTTCGAAAATGGATGACTGTGCAGTAATTTGCCTATTCTTGGATGGGAAAATGGATTCAGAATCAGAGAATGAAGAACAAGCTTCTTCTGCTGCTCTTCAAACCAATCAAATGGGCAACAACACTGCAGATTCAGATGAAGAGCAGAGGTCTGAGCCAAGCTTGCAAAGGAACAACACAGTCCGATCATCGGAAGAAAACGACCAAATTGGAGGACTATCTTCACATGGTGAAGAGAATGGAGAAACAATGTCTGCTGAAGATGAGAATTGGTTGGGATTGGAGGGTGTAACAAGAGTAAACTCTCTAGTTCAACTCCCTAGATTTTCTTGA 1413 45.15 MGSCLSTGYQSSCHGGSNGETVSGSCCLGIGVGGRIARKITFSDHIFSLQHLNSIPNRLVFNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAVFCGIFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHNGSDRSSCFGWGRGNSADGEGLETAGSEEDKSSSLWRRAFLKSYKSMDKELKSHPKLDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSCDSLVATQLTVDLKPDLPREAERIKKCKGRVFALQDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRLLTDYDLFIVLASDGVWDVLSNEEVVEIVNSTSTRSSAARMVVDAAAREWKLKYPTSKMDDCAVICLFLDGKMDSESENEEQASSAALQTNQMGNNTADSDEEQRSEPSLQRNNTVRSSEENDQIGGLSSHGEENGETMSAEDENWLGLEGVTRVNSLVQLPRFS 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4009574 4013016 + MC02g0482 Mch2g0574 681496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0574 470 Gene3D - 59 376 IPR036457 -
Mch2g0574 470 MobiDBLite consensus disorder prediction 382 453 - -
Mch2g0574 470 SUPERFAMILY PP2C-like 58 376 IPR036457 -
Mch2g0574 470 MobiDBLite consensus disorder prediction 1 20 - -
Mch2g0574 470 MobiDBLite consensus disorder prediction 385 404 - -
Mch2g0574 470 ProSiteProfiles PPM-type phosphatase domain profile. 67 374 IPR001932 -
Mch2g0574 470 MobiDBLite consensus disorder prediction 414 440 - -
Mch2g0574 470 FunFam probable protein phosphatase 2C 52 58 377 - -
Mch2g0574 470 CDD PP2Cc 73 374 IPR001932 -
Mch2g0574 470 Pfam Protein phosphatase 2C 165 352 IPR001932 -
Mch2g0574 470 PANTHER PROTEIN PHOSPHATASE 69 373 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch2g0574 470 SMART PP2C_4 56 372 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0402 Mch-Chr11:2536674 Mch2g0574 Mch-Chr2:4009574 1.99E-88 dispersed
Mch2g0574 Mch-Chr2:4009574 Mch8g2467 Mch-Chr8:27594408 7.21E-137 dispersed
Mch7g0184 Mch-Chr7:2298077 Mch2g0574 Mch-Chr2:4009574 1.43E-134 transposed
Mch2g0574 Mch-Chr2:4009574 Mch4g0169 Mch-Chr4:1134981 6.18E-215 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0574 - - - 0.0