Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0589 | ATGAGATGGCATTCCTTCTACACCAGAGCCTCTCAGGCTTTTCACGACCATCCTACCATCTCCAAAATTCTCATCGTTTTCACTCTCAGTGGCGGTGGACTGGTGGCATCTTCTAATGGCAGATTGCTGTATCCTTCTGCATATGCTGATGCAGTCCAACAAGATGACTGCAAGAAGAAGAAGGTGGTGGTGCTTGGAACAGGATGGGCTGGTACCAGCTTTCTGAAGAACCTTAAGAGCTCCTCTTATGATGTTCATGTTATTTCTCCTCATAATTACTTTGCCTTCACCCCTTTGCTTCCCAGTGTCACTTGCGGCACAGTCGAAGCACGCAGCATCGTTGAACCAATTCGTACTATCACAAAGAAGAAAGGTTTGGGTATTAAATTTAGGGAAGCTGAGTGCTATAAGATAGATGCAGAGAAGAAGGTGGTGTTCTGTCGATCAAGTCAAAACACGAATTTGGGTGGCAGAGAAGAATTTTCTGTAGACTACGACTATCTGATAATAGCCATGGGAGCTAAATCCAACACTTTTAACACCCCTGGAGTTGAGGAATATGCTCACTTCTTGAAGGGAGTGGAAGATGCTCAGAGGATTCGTCAGACTGTAATTGATTGTTTCGAGCGAGCCAGCCTTCCAAATCTTAGTGAAGAAGAGAAGAAGAGAACTCTTCACTTTGTAATAGTTGGAGGTGGTCCAACTGGGGTGGAATTTGCCGCAGAGCTTCATGATTTTGCAGTTGAGGACTTAGGAGTGTTGTATCCTTCATTGAAAGACTATGTGAAAATAACCCTCCTAGAGGCAGGGGATCATATTTTGAACATGTTTGACAAGAGGATTACTGCCTTTGCTGAAGAAAAATTTCAAAGAGATGGGATTAGTGTAAAAACTGGTTCCATGGTGGTAAAAGTAAGTGACAAGGAAATCTCCACCAAAGAAAGAACAACTGGTGAATTTGTGTCTGTTCCTTATGGAATGGTCGTGTGGTCCACCGGCATTGGCCCTCGTCCTCAAGTCGTCGATTTCATGAAGCAGATTGGTCAGACTAACAGAAGAGCTTTGGCGACCGATGAGTGGCTAAGGGTTGAAGGATGTGATGACGTCTATGCTCTTGGTGATTGTGCTACCATAAATCAAAGAAGAGTCATGGAAGATATTGCAGTAATATTCAGTAAGGCAGACAAGAACAAGTCAGGAACTTTAGGCCTGCAAGATTTTCAAGAAGTGGTAGGTGATATCTGTGAGAGGTACCCTCAAGTAGCGCTCTATCTGAAGAGGAATCAAATGAAGAACTTTGCAGCTTTGTTGAAGAAGTCACAATCGGACGCACAGAATCATACGGCTGAACTGGATATCGAAACCTTTAAATCCGTACTTTCTGAAGTTGATTCTCAGATGAAAAATCTGCCTGCTACTGCTCAAGTGGCTGCTCAACAAGGTGAATATCTTGCAAGCTGCTTCAACCGGATGGAGCAGTGTGAAAAGTACCCTGAAGGCCCTCTCCGATTTAGAGGGACTGGACGCCACCGGTTCCATCCTTTCAGGTATAAGCATTTTGGGCAGTTTGCTCCTCTGGGGGGAGAACAAGCTGCAGCTCAACTACCTGGAGATTGGATCTCAATTGGTCACAGCAGCCAGTGGCTTTGGTACTCCGTTTATGCAAGCAAGCTAGTAAGCTGGCGCACAAGGTTTCTGGTCATCTCAGATTGGGGTAGAAGATTCATCTTCGGCAGAGATTCGAGCAGAATCTGA | 1755 | 44.84 | MRWHSFYTRASQAFHDHPTISKILIVFTLSGGGLVASSNGRLLYPSAYADAVQQDDCKKKKVVVLGTGWAGTSFLKNLKSSSYDVHVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRTITKKKGLGIKFREAECYKIDAEKKVVFCRSSQNTNLGGREEFSVDYDYLIIAMGAKSNTFNTPGVEEYAHFLKGVEDAQRIRQTVIDCFERASLPNLSEEEKKRTLHFVIVGGGPTGVEFAAELHDFAVEDLGVLYPSLKDYVKITLLEAGDHILNMFDKRITAFAEEKFQRDGISVKTGSMVVKVSDKEISTKERTTGEFVSVPYGMVVWSTGIGPRPQVVDFMKQIGQTNRRALATDEWLRVEGCDDVYALGDCATINQRRVMEDIAVIFSKADKNKSGTLGLQDFQEVVGDICERYPQVALYLKRNQMKNFAALLKKSQSDAQNHTAELDIETFKSVLSEVDSQMKNLPATAQVAAQQGEYLASCFNRMEQCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQAAAQLPGDWISIGHSSQWLWYSVYASKLVSWRTRFLVISDWGRRFIFGRDSSRI | 584 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4066076 | 4071115 | + | MC02g0495 | Mch2g0589 | 681511 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0589 | 584 | SUPERFAMILY | EF-hand | 344 | 469 | IPR011992 | - | |
Mch2g0589 | 584 | FunFam | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial | 50 | 411 | - | - | |
Mch2g0589 | 584 | Gene3D | - | 49 | 429 | - | - | |
Mch2g0589 | 584 | Gene3D | - | 430 | 583 | - | - | |
Mch2g0589 | 584 | SUPERFAMILY | FAD/NAD(P)-binding domain | 220 | 379 | IPR036188 | - | |
Mch2g0589 | 584 | Pfam | Pyridine nucleotide-disulphide oxidoreductase | 60 | 381 | IPR023753 | GO:0016491(InterPro) | |
Mch2g0589 | 584 | Pfam | NDH2 C-terminal domain | 519 | 580 | IPR054585 | - | |
Mch2g0589 | 584 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 382 | 417 | IPR002048 | GO:0005509(InterPro) | |
Mch2g0589 | 584 | ProSitePatterns | EF-hand calcium-binding domain. | 395 | 407 | IPR018247 | - | |
Mch2g0589 | 584 | PANTHER | NADH DEHYDROGENASE | 47 | 584 | IPR045024 | GO:0003954(InterPro)|GO:0006116(InterPro) | |
Mch2g0589 | 584 | SUPERFAMILY | FAD/NAD(P)-binding domain | 59 | 278 | IPR036188 | - | |
Mch2g0589 | 584 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 62 | 81 | - | - | |
Mch2g0589 | 584 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 226 | 244 | - | - | |
Mch2g0589 | 584 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 165 | 183 | - | - | |
Mch2g0589 | 584 | FunFam | External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial | 428 | 583 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0589 | Mch-Chr2:4066076 | Mch2g0833 | Mch-Chr2:5723072 | 2.25E-70 | dispersed | |
Mch9g1876 | Mch-Chr9:20444378 | Mch2g0589 | Mch-Chr2:4066076 | 4.80E-06 | transposed | |
Mch1g1834 | Mch-Chr1:18437797 | Mch2g0589 | Mch-Chr2:4066076 | 3.89E-69 | wgd | |
Mch2g0589 | Mch-Chr2:4066076 | Mch3g1172 | Mch-Chr3:14961359 | 5.60e-312 | wgd | |
Mch2g0589 | Mch-Chr2:4066076 | Mch4g0180 | Mch-Chr4:1210582 | 4.03E-264 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g0589 | K03885 | - | csv:101209855 | 1065.06 |