Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0602 ATGGCAAAGGCAAACAAGGGGTGTCAGTGTCACCAATACCATTCCATGGTCTCTAATTTATGCAATTACTTTTTGCTACTATTATTTCTGTCCGCCGGAGGCACCGCCGTCGATCAATTAAGAGACAGTCATGGGGATTCTGCCGTTTCGATGGGAGGAAGATTTGAAGTTGGTTTTTTCAGTCCTGAGGGAAGCTCAGACGGAAGAAGATACGTGGGAATATGGTTTCGCGGCTCCAAACCGCAAGCCGTTGTATGGGTTGCCAACAGAGATCGGCCATTGTCCGACAACAATGGAATTTTCACCATTAAAGATGGCAACCTCATGGTACTGGACTCAAAGGGCACTTCTTTATGGTCTACCGGCGTCGGAGATTCCACCAACGAGACAAGAACAGCGATCCTAATGGATTCTGGGAACTTGGTTCTCAAGGAATTAGGCGGCAATGGCACAATTGTGTGGCAGAGTTTCCAAAATGCAACCGACACTATACTTCCCGGCATGAACATGGGCCACGACTTGAGGTTGACTTCATGGCGAAGTGCAGACGACCCGTCGCCAGGGAATTTCACGTTTCTCAAGGATCTGGGGAGCCGCTACATAATCGAGCGGCATAGTGCACGGTATTGGGTGAGCAGCGGAGAGTGGCAAAATTACTCCACCGAAACAGAGGGAAAAATTGCTGAAGTAATAGGTTCTTTGTCAAAAATCGATCTTTCTAACTTGAAGGCCTCCAACTATAGCATTCGTTTTCAAGATCAATTGCTGGATTACAACTATACAAGAGCAGTTATGAGTTTCAGCGGGGAAATACAGTACCTTGCTAGGAACAGAATGAGTGGAAAATGGGATGTCATCTGGTCAGAACCGGAAACCAGATGTAGTGTATTGACAGCTTGTGGGAGGTACTCTATTTGTCGGAGTGACAGTATGCATTGCAGGTGCTTGCCAGGGTTTGAGCCAAAGTCGGAGGATAAATGGAATTCTGGTGATTACTCAGATGGGTGCCAGAGAAAATCAGAAATTTGCCTCGGAGAAACGGCTCAAATTCGAGAGTTCTTGACAATAAATTTGAAGGTGAGTAAGACGTCTAATGTTGTCACAGTCGAAGATAATGGGGAGTGTCGAAGCAGGTGCCTTGAATCTTGTAAATGTGAAGCGTATTCAGAAATCAAAAGCAATGAGAGAGCTGATGGTACTGTTTCGTGTGCCATTTGGGAGGTTGAAGATGAACTTAAAAACATTGTGGAATATGCAGATGGTGGTGGTGTCATTAACATCCGTGTCAATCATTCTGACTTTGAGTTTACAAAGTTCGACTGTGAAGCATGTGGAGGCAACATCATCCCTTATCCTCTAAGCCTAATCACAAGATACACCAACTGCGGTACTCCTTTGTATCGTAACTTCACTTGTGACACTTCCAGCGGTCGGATGGGCTTTCTTTGGGAAGGTGTTGACTACAATCTCACATACATCAATCCAGAACAAAATACTTTTACCATTGGAACAAACCAGTCTATCTGCAGAGGTAATGATGCAGAGCAAATTCAAAAGCTTCTGAAATTGGAACAGTCGTCTATATACCAAGTCATCAGCGGTTGTGACTCTGAGTTCAATGAAGTTGATGTTCAATGGAAGAAACCATTAGAGCCAATCTGTAATTCACCAGAAGATTGCAGCTACTGGCCGAATTCGAAATGCAACTCATCAACAGATGGAACAAACAGGTGCTTGTGCAATCCTTCTTTCGAGTGGATTGGCACTGGCTGCCGTAAAGGGACAGAGAATGGTTGGAAAGAGCCACGTCCAAATGTCAGAGTTGTTATCATTGTCACAGTGACTACCATTGTCGTCTTGATTGTTATTTCTTGTTTGGTGTTGTATATTTACTACAAACGAAGGAAGCTACAAAATCAACAAGAGAAAAGAGCAAGTTTTTGGCGAAATCAGGAAACTCACTTGTATGACACTGAGAAACGTGTGAGAGACTTTATGGGTTCCGGAATGTTTGGAGAAGATGATAGAAAAGCCATAGAAGTGCCAGTTTTTGATTTGGAAACCATACTCAGTGCTACAGACAACTTCTCTGAAGCTAACAAAATTGGGAGAGGGGGATTTGGGACAGTTTACAAGGGAAATTTTCCAGGACTGGAAACTGCAATAAAGAGGCTGTCCAGAGGCTCTGCCCAGGGCGTAGATGAGTTCAAGAATGAGGCCATTCTGATCGCCAAACTTCAGCATCGAAATCTCGTTAGACTTTTGGGCTATTGTGTTGCGGGAGAAGAAAAAATACTGGTCTATGAATATATGCCCAACAAAAGCTTAGACTTTTTTTTATTTGGCAATTTTGATCTTGATATACAAGAATCTTCTTCTGTTTTGGTAGATCGAACACAATGTTTACTGGTGAGTTGGGAAATGCGGTTTAATATCATAGTGGGAATCGCCAGAGGGCTGGTTTATCTCCATGAAGATTCAAGGTTGAGGATTATCCATAGGGATATGAAAACAAGCAATGTTCTGTTAGACGCAGAAATGAATCCTAAAATTTCCGACTTTGGTTTGGCAAGAATCTTTGATGGCAAACAAACTGAGGCAACCACCACTAGAGTTGTTGGAACTTATGGGTACATGTCACCAGAATATGCGTTGGACGGATCATTCTCCATCAAATCTGATGTGTTCAGCTTTGGTATAGTTGTACTTGAGATCGTGAGTGGAAGAAGAAACACTGGTTTTTACCAGTCAAAAGAAGCCTTGAACCTTCTTGGACACGTATGGAAATTGTGGAGAGACAAGGAAGCATTAGACATAACAGAGGCGGGTGTTCGTGAAAGGTGCAATCCAAGTGAAGTTATAAAGTGTGTGGCTGTGGGGCTGCTGTGTGTTCAAGAAGATCCCAACGATCGTCCCACCATGTCGAGTGTAGCTTTTATGCTCAGCTCTGGCACCGACCCTGCTTCTCTTCCAAATCCTAAACAGCCAGCTTTCGTTGATAAAAAATTAACTCCTACTTCTTCTGCAACTTCTTCTTCGGGCTTTAAGCAAGAAATAGTAAGCAACGATTTTAGCTTACTTGAGCCTCGTTAA 3093 43.39 MAKANKGCQCHQYHSMVSNLCNYFLLLLFLSAGGTAVDQLRDSHGDSAVSMGGRFEVGFFSPEGSSDGRRYVGIWFRGSKPQAVVWVANRDRPLSDNNGIFTIKDGNLMVLDSKGTSLWSTGVGDSTNETRTAILMDSGNLVLKELGGNGTIVWQSFQNATDTILPGMNMGHDLRLTSWRSADDPSPGNFTFLKDLGSRYIIERHSARYWVSSGEWQNYSTETEGKIAEVIGSLSKIDLSNLKASNYSIRFQDQLLDYNYTRAVMSFSGEIQYLARNRMSGKWDVIWSEPETRCSVLTACGRYSICRSDSMHCRCLPGFEPKSEDKWNSGDYSDGCQRKSEICLGETAQIREFLTINLKVSKTSNVVTVEDNGECRSRCLESCKCEAYSEIKSNERADGTVSCAIWEVEDELKNIVEYADGGGVINIRVNHSDFEFTKFDCEACGGNIIPYPLSLITRYTNCGTPLYRNFTCDTSSGRMGFLWEGVDYNLTYINPEQNTFTIGTNQSICRGNDAEQIQKLLKLEQSSIYQVISGCDSEFNEVDVQWKKPLEPICNSPEDCSYWPNSKCNSSTDGTNRCLCNPSFEWIGTGCRKGTENGWKEPRPNVRVVIIVTVTTIVVLIVISCLVLYIYYKRRKLQNQQEKRASFWRNQETHLYDTEKRVRDFMGSGMFGEDDRKAIEVPVFDLETILSATDNFSEANKIGRGGFGTVYKGNFPGLETAIKRLSRGSAQGVDEFKNEAILIAKLQHRNLVRLLGYCVAGEEKILVYEYMPNKSLDFFLFGNFDLDIQESSSVLVDRTQCLLVSWEMRFNIIVGIARGLVYLHEDSRLRIIHRDMKTSNVLLDAEMNPKISDFGLARIFDGKQTEATTTRVVGTYGYMSPEYALDGSFSIKSDVFSFGIVVLEIVSGRRNTGFYQSKEALNLLGHVWKLWRDKEALDITEAGVRERCNPSEVIKCVAVGLLCVQEDPNDRPTMSSVAFMLSSGTDPASLPNPKQPAFVDKKLTPTSSATSSSGFKQEIVSNDFSLLEPR 1030
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4134040 4137925 + MC02g0507 Mch2g0602 681524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0602 1030 SMART serkin_6 696 980 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0602 1030 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Mch2g0602 1030 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 771 988 - -
Mch2g0602 1030 SUPERFAMILY Protein kinase-like (PK-like) 680 981 IPR011009 -
Mch2g0602 1030 Pfam PAN-like domain 358 408 IPR003609 -
Mch2g0602 1030 ProSiteProfiles Protein kinase domain profile. 696 998 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0602 1030 Pfam Protein tyrosine and serine/threonine kinase 699 978 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0602 1030 Pfam D-mannose binding lectin 84 175 IPR001480 -
Mch2g0602 1030 SMART blect_4 39 160 IPR001480 -
Mch2g0602 1030 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 185 IPR036426 -
Mch2g0602 1030 FunFam Os08g0179000 protein 667 770 - -
Mch2g0602 1030 CDD B_lectin 49 159 IPR001480 -
Mch2g0602 1030 Gene3D Transferase(Phosphotransferase) domain 1 771 990 - -
Mch2g0602 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0602 1030 Gene3D Phosphorylase Kinase; domain 1 670 770 - -
Mch2g0602 1030 ProSitePatterns Protein kinases ATP-binding region signature. 702 723 IPR017441 GO:0005524(InterPro)
Mch2g0602 1030 Pfam S-locus glycoprotein domain 237 323 IPR000858 GO:0048544(InterPro)
Mch2g0602 1030 ProSiteProfiles PAN/Apple domain profile. 343 429 IPR003609 -
Mch2g0602 1030 CDD STKc_IRAK 702 981 - -
Mch2g0602 1030 Gene3D - 38 158 IPR036426 -
Mch2g0602 1030 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 36 996 - -
Mch2g0602 1030 MobiDBLite consensus disorder prediction 986 1014 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0602 Mch-Chr2:4134040 Mch3g1187 Mch-Chr3:15081308 4.24E-115 dispersed
Mch9g0350 Mch-Chr9:2585369 Mch2g0602 Mch-Chr2:4134040 1.45E-11 dispersed
Mch1g1806 Mch-Chr1:18260398 Mch2g0602 Mch-Chr2:4134040 1.35E-92 wgd
Mch11g1127 Mch-Chr11:7892222 Mch2g0602 Mch-Chr2:4134040 2.73E-116 wgd
Mch2g0602 Mch-Chr2:4134040 Mch3g1179 Mch-Chr3:15018230 1.13E-106 wgd
Mch2g0602 Mch-Chr2:4134040 Mch4g0203 Mch-Chr4:1342039 8.25E-308 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77196 PF07714 PK_Tyr_Ser-Thr 3.70E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0602 - - - 0.0