Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0617 ATGGTGATGCAGAGAGAAATGGAGTTGAGAGGAGCCGGTTATGTGTTCATTTTCGTGACTCTGCTCTGTGCATTGGCAATAGCGAGTTCAGAGGGCAGAAGGAAGACGATCGAAATGGTTCTCTTCAGTGCCGATGATTGCCGCCTCACATCCTCGGAGTTGGGAGCACATATGAGCGAGCTGGCGTGCATGAGAGAATTGGCAGAGGGGGAATATAAAACTGAAGAATTCGTTCCTTGTGTCCAAAAAGGGAACGGAGATAGAGCTATCAGAATTCTGCCTCCTGACATGAAACAGGGCTTATTGGATTGTCTTAGAAGGAAAAATGTGCTTTCTCGTTCTTCTTCGGAAGAACGTCCCAGCTTTAACGATTGGCTTATAAGGCCAGTTGAAATGATCTTCGGGGGATCCAATATTCCCATGAGACATCTGATTAGCAAGTCAGAAAGTTCGCCACCAACGGACGCCGCTGCTGAAGCTCCAGCCCCATCCCCATCCCCATCCCCATCCCCATCCCCTTCACCAGATTCACCAGCAGATTCTCCATCACCATCTCCAAGTGATGCTCCAGTTTCATCGAAGAGCGATGCACCGTCGCCCTCTGCTGAAGCCCCAGCCAAGGCTCCATCACCAAAGAATCATGATCCTGTCAAGTCTCCGGTCGCCCGCTCTCCACCGCCATCCAACAAGGACGAGGACAAGGACAAGGACAAGGTGCGCTCTCCTCCGCCATCCAACGAGGACAAGGACGAGGTGCGCTCTCCACCACCACCAAAGGAGGACAATGACGAGGTGCGCTCTCCACCGCCACCAAAGGAGGACAAGGACAAGGACAAGAACGAGAACACGGACAAGGACGCAGATAACTTTGATACGCCTCCAGCCCCGGTGGTCCGGTCACCACCTTCTCCACGTGCTCCTTCCAAGCCTCACCCTTCAGAGGAGCAGGAGGAGCAGGATAACAGCGAGACGGTCATAATTGCCGCTGTGGTTGCAACTGGTGTGCTAGTTGTTCTTGTGGTTGCCATGCTTTTGTTCTGCTGTCGCAGTGGTGAGAAAAGTAAGGTTGAACCGCAGATTGGGCTAAAGGATGAGAGACCTCTTCTCAACATATCTTTGAGCGAAATATCAGCGGGTTCTTCACAGAAGTCTTACACCATTGGAAATTCAGGAACGAAAGAGTTCAGCGCTGATAATGGAAATAAAGCACCCTGTTTTGTTGGTAACTTGTCGGTGAATCCTGAAAATGGTACCTCTAATGGTGAGGGTGTAACGTCTGAAGGTAACCCATCAATAATGCCGCCTCTGAAACCCCCACCTGGAAGACAAGACTCTCAGCCTCCCGATGCAGCTCCACCTCCATCAGCAGCAGCAGCAGCAGCAGCAGCTACGGCACCTCCAGCACCTCCGCCCCCTGCATCTAGGGCCCCACCCCCACCACCCATGAAAGTTGGTCGGCCGCCACCTGCCCCACCGGGAGCAATTCCTGGTAAACCTCAAGCAGCGCCTTTGGGACCACATAAGCGTGGACCTAGTGGCTCAAGTATGGATGCGGATTCAGGTGGCCAAAAGACCAAGTTAAAGCCCTTCTTCTGGGATAAGGTTCTTGCCAACCCTGGCCAATCCATGGTCTGGCATGAGATCAGTGGTGGGTCTTTCCAATTCAATGAGGAGATGATGGAGTCTCTGTTTGGATATACAGCTGCGGAAGCTAACAGAGAACGCAGGAAAGATTCAGTTTCGGATTCTTCAGTGCAGTACATTCAAATCATCGACGCTAAGAAAGCACAAAACCTTTCAATTCTGCTACGAGCACTCAATGTGACAACAGCAGAAGTTTTGGATGCCCTTCAAGAAGGCAGAAATCCTGATCTTCCAGCGGAGCTTCTCCAAACCTTGTTGAAGATGGCACCAACAACAGAAGAGGAACTCAAATTGAGATTATTCACGGGTGACCTTTCTCAGCTAGGTCCTGCAGAACGGTTCCTCAAAGTGTTGGTGGACATTCCATTTGCTTTTAAAAGATTGGAGTGTCTTCTTTTCATGCTCTCCATGGCGGAAGACGTCACTAACATTAAAGAGTCATTTGCAACTCTTGAGGTTGCTTCCAACAAGCTCAGAAACAGCAGGCTATTTCTAAAGCTATTAGAAGCAGTCCTCAAAACTGGCAATCGGATGAACGTGGGGACGTACCGTGGCGGTGCTCAGGCGTTTAAGCTCGACACGCTCTTGAAACTGGCTGATGTTAAAGGAACCGACGGCAAGACTTCGCTCTTACACTTTGTTGTACAGGAGATTGTTCGTTCGGAGGGCATACGAGCAGCCCGCTCAGCCAGAGAAAGTCGAAGCCTCTCCAGTATATCCTCCGCCGATACGATTCTCGAGGACTTCACCGATGATTCAGCGGAACGCTATCGGCAATTAGGCCTTCAGGTAGTTTCTGGTTTGAGCACGGAGCTTGCGGACGTTAAAAAGGCAGCAGCCATAGAACCGGAAGGCCTGACGACGACCATATCGAAACTCGGGCAGTCTCTGTTGAAAGCCAAAGGATTTATAAATGCGGAGATGAAAAGTTTAGACGAAGACAGCAAATTCCTCCAATCGGTGTCTAAATTTTTGGAGGAAGCAGAAGCGGATATAGCGTGGATTGGAGGAGAAGAAAAGAAGATAATGGCACTAGTAAAGAGCACGGTGGATTACTTCCATGGAAATTCTGGAAAGGACGAAGGATTGCGATTATTCACGATCGTACGAGATTTCTTAATTGTGTTGGACAAGACGTGTAAACAGGTTAAAGAAGCAGCTGAAGCTGCGGCAAAGCAAGCGAAGAGTTCCAAAAAAGAACCTCCGACACCGTCGGCTACTTCTAAGCAGAATTCAGATCTTCGGAAGCGGCTATTTCCGGCGATCGCAGAACGACGGGTGGGCGAGGAGTCAAATTCTTCGGACGACGAGGAAGACGACGGCGAGAGTTCATCTTCATCGTCCTAG 2991 50.18 MVMQREMELRGAGYVFIFVTLLCALAIASSEGRRKTIEMVLFSADDCRLTSSELGAHMSELACMRELAEGEYKTEEFVPCVQKGNGDRAIRILPPDMKQGLLDCLRRKNVLSRSSSEERPSFNDWLIRPVEMIFGGSNIPMRHLISKSESSPPTDAAAEAPAPSPSPSPSPSPSPDSPADSPSPSPSDAPVSSKSDAPSPSAEAPAKAPSPKNHDPVKSPVARSPPPSNKDEDKDKDKVRSPPPSNEDKDEVRSPPPPKEDNDEVRSPPPPKEDKDKDKNENTDKDADNFDTPPAPVVRSPPSPRAPSKPHPSEEQEEQDNSETVIIAAVVATGVLVVLVVAMLLFCCRSGEKSKVEPQIGLKDERPLLNISLSEISAGSSQKSYTIGNSGTKEFSADNGNKAPCFVGNLSVNPENGTSNGEGVTSEGNPSIMPPLKPPPGRQDSQPPDAAPPPSAAAAAAAATAPPAPPPPASRAPPPPPMKVGRPPPAPPGAIPGKPQAAPLGPHKRGPSGSSMDADSGGQKTKLKPFFWDKVLANPGQSMVWHEISGGSFQFNEEMMESLFGYTAAEANRERRKDSVSDSSVQYIQIIDAKKAQNLSILLRALNVTTAEVLDALQEGRNPDLPAELLQTLLKMAPTTEEELKLRLFTGDLSQLGPAERFLKVLVDIPFAFKRLECLLFMLSMAEDVTNIKESFATLEVASNKLRNSRLFLKLLEAVLKTGNRMNVGTYRGGAQAFKLDTLLKLADVKGTDGKTSLLHFVVQEIVRSEGIRAARSARESRSLSSISSADTILEDFTDDSAERYRQLGLQVVSGLSTELADVKKAAAIEPEGLTTTISKLGQSLLKAKGFINAEMKSLDEDSKFLQSVSKFLEEAEADIAWIGGEEKKIMALVKSTVDYFHGNSGKDEGLRLFTIVRDFLIVLDKTCKQVKEAAEAAAKQAKSSKKEPPTPSATSKQNSDLRKRLFPAIAERRVGEESNSSDDEEDDGESSSSSS 996
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4239331 4243898 - MC02g0516 Mch2g0617 681539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0617 996 Gene3D Formin, FH2 domain 531 964 IPR042201 -
Mch2g0617 996 Pfam Formin Homology 2 Domain 523 923 IPR015425 -
Mch2g0617 996 MobiDBLite consensus disorder prediction 158 185 - -
Mch2g0617 996 MobiDBLite consensus disorder prediction 408 525 - -
Mch2g0617 996 PANTHER FORMIN-RELATED 258 985 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Mch2g0617 996 MobiDBLite consensus disorder prediction 295 309 - -
Mch2g0617 996 MobiDBLite consensus disorder prediction 411 427 - -
Mch2g0617 996 MobiDBLite consensus disorder prediction 227 288 - -
Mch2g0617 996 MobiDBLite consensus disorder prediction 946 962 - -
Mch2g0617 996 MobiDBLite consensus disorder prediction 966 980 - -
Mch2g0617 996 SUPERFAMILY Formin homology 2 domain (FH2 domain) 467 942 - -
Mch2g0617 996 ProSiteProfiles Formin homology-2 (FH2) domain profile. 517 950 IPR015425 -
Mch2g0617 996 MobiDBLite consensus disorder prediction 432 454 - -
Mch2g0617 996 MobiDBLite consensus disorder prediction 981 996 - -
Mch2g0617 996 SMART it6_source 517 939 IPR015425 -
Mch2g0617 996 MobiDBLite consensus disorder prediction 940 996 - -
Mch2g0617 996 MobiDBLite consensus disorder prediction 144 321 - -
Mch2g0617 996 Coils Coil 928 948 - -
Mch2g0617 996 MobiDBLite consensus disorder prediction 464 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0617 Mch-Chr2:4239331 Mch6g2239 Mch-Chr6:24610220 9.76E-105 dispersed
Mch2g1335 Mch-Chr2:9454495 Mch2g0617 Mch-Chr2:4239331 1.41E-113 transposed
Mch9g1150 Mch-Chr9:12132431 Mch2g0617 Mch-Chr2:4239331 9.56E-93 transposed
Mch11g1148 Mch-Chr11:8056654 Mch2g0617 Mch-Chr2:4239331 5.71E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0617 K28090 - csv:101206094 1041.95