Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0628 ATGAGAATGGGGCGGCTTACTTGTTTGGCGTTGGCCATTGTGGTTGGTCTTCTGGGACTGATAGGCTCAACTCAAGCTCAGCTGCAGCTTGGCTTCTATGCCAAAAGCTGCCCAAAGGCTGAAAAGATTGTGCTAGATTTCGTTCACCAGCATATCCACAATGCCCCTTCACTGGCAGCAACTTTCATTAGAATGCACTTCCATGATTGTTTCGTCAGGGGTTGTGATGCGTCGGTGCTGATAAATTCCACGTCAAATAACCAAGCTGAGAAGGATTCTCCACCAAATCAAACACTCAGAGGCTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGACGAATGCCCTGGAGTTGTCTCTTGTGCAGATGTTCTTTCCTTGGTTGCAAGAGATACCGTTGTAGCCATAGGAGGTCCTTTTTGGCAAGTTCCAACTGGCCGAAGGGACGGAGTGATCTCAAGGTCATCAGAAGCCCGGGCTGACATCCCTCCTCCATTTGGAAACTTTTCAACACTCCAAAGACTTTTTGCAAACCAAGGCCTTGATCTAAAAGACTTAGTCTTGCTATCAGGCGCTCACACGATCGGTATAGCACACTGCTCATCGTTCTCCAACCGACTCTACAATTTCACCGGCGTTGGAGACCAAGACCCCTCTCTCGACCCCAAATACGCCGCTAATCTAAAGGCCAACAAATGCAAAACTCCCACCGACAACAGCAAGGTGGAGATGGACCCAGGAAGTCGCAACACTTTTGACCTTAGCTACTACTCTCTTCTTCTCAAAAGAAGGGGCCTTTTCGAATCCGATGCTGCCCTCACCACAGACCAAACCACATTGGCTCTCGTTCAGAAACTCGTTCAAGGACCCATTGAAGAGTTCTTCGCTGAGTTTGCAGCATCAATGGAGAAAATGGGCCGGATTAAAGTGAAGACTGGTACGGAGGGTGAGATCAGAAGGCGATGCGCTGTGGTGAATAGTTGA 987 48.23 MRMGRLTCLALAIVVGLLGLIGSTQAQLQLGFYAKSCPKAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINSTSNNQAEKDSPPNQTLRGFDFIDRVKSLLEDECPGVVSCADVLSLVARDTVVAIGGPFWQVPTGRRDGVISRSSEARADIPPPFGNFSTLQRLFANQGLDLKDLVLLSGAHTIGIAHCSSFSNRLYNFTGVGDQDPSLDPKYAANLKANKCKTPTDNSKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDQTTLALVQKLVQGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRRCAVVNS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4291657 4294721 - MC02g0526 Mch2g0628 681550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0628 328 Gene3D - 31 327 - -
Mch2g0628 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g0628 328 Gene3D Peroxidase, domain 2 164 306 - -
Mch2g0628 328 FunFam Peroxidase 31 169 - -
Mch2g0628 328 Pfam Peroxidase 46 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PANTHER PEROXIDASE 25-RELATED 20 323 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Mch2g0628 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Mch2g0628 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0628 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Mch2g0628 328 FunFam Peroxidase 164 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1612 Mch-Chr1:17200436 Mch2g0628 Mch-Chr2:4291657 2.09E-87 dispersed
Mch2g0628 Mch-Chr2:4291657 Mch8g0870 Mch-Chr8:6209238 7.05E-85 dispersed
Mch6g0723 Mch-Chr6:4975018 Mch2g0628 Mch-Chr2:4291657 6.99E-86 transposed
Mch7g1130 Mch-Chr7:15199079 Mch2g0628 Mch-Chr2:4291657 6.88E-105 transposed
Mch2g0628 Mch-Chr2:4291657 Mch4g0227 Mch-Chr4:1463068 2.25E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0628 K00430 - csv:101213629 589.726