Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0637 ATGGGGAACTTATTGATTCTTACATTGATTAGTTCGATATGGGCATTTCTTGCTGGTTCTGCATGTTGCCAAAGGCCAGCGGTTGTGAACATTGGTGCAGTTTTTACTTTTGATTCTGTTATAGGAAGAGCAGCGAAGGTGGCAATGGAAGCTGCAGCTTTGGATGTTAATGCAGACCCAACCATTCTCAATGGAACGAAACTGAATTTGATCATGGCAGATACACATTGTAATGTTCTCTTGGGTTCTATTGGAGCTTTCCAGGTACTTGAGAAAGATGTAGTAGCCATCGTTGGGCCTCAATCTTCAGTTGTAGCTCATATGGTTTTACAGATTGCTAATAATCTCCAAGTGCCTCTTATATCATATGCTGCTACTGACCCAACTTTATCTGCTCTCCAATTCCCCTTTTTCTTACGGACTACTCAGAGTGACTCGTATCAGATGACTGCTATGGCAGAATTGATCGACTTTTATGAGTGGAAAGAGGTGATAATGATCTTTGTGGATGATGATTATGGTAGAAATGGAATGTCCACTTTAGCTGATGAACTTGACAAGAAGATGTTTAAAATTTCTTACAAAATACCCTTACCTTCTCAGTTTAATCTCAGTGAAATTACAGACATACTCAATAAATCCAAGTTACTTGGTCCCCGTATCTATGTTGTTCATGTCAATCCTGATCCAAAATTAAGTATCTTCAAAATAGCTCATCAACTTAATATGATGACAAGTGATTATGTGTGGCTTGCAACAGACTGGCTTTCTACGACCTTAGATTCAATTCTGCCCACGCACCAAACCTCTCTAAACATCCTTCAAGGAGTGGTTGTACTTCGTCAACATACTCCAGAATCCAGCCAAAAGACAAGATTATGGTCTCGGTTAAGGAAGATGCTGCCAGAAGTCTCCAGTAATTCTTCATTGAACGTCTATGCTCTTAGTGCCTATGATACCATTCAATTAGTTGCACGTTCCATTGATAAGTTTCTAAATGAAGGTAGGAGCATTACGTTCTCTTTGAAGAACAAGTTTCATGATTTAAATACATCTAAAATGCCCTGGGGGAAGCTCAAAATATTTGATGATGGTGCTCTTCTTTTGAGCATATTGTTGCAGACAAACTTTACCGGTTTAAGTGGTCAGATTGAGTTTAATTCAGATCGGAACGTTGTCAGTAGAGCCTATGAGGTGATAAATATAGATCAGATGGGATTGCGTAGAGTTGGTTATTGGTCTAATATCGCAGGCTTTACAATCCAATCACCGGAAACTCTGAAACAGAAACAAATTAGTTCTACCCACCTGAACCAGACTCTTGGCAATATTACCTGGCCTGGTGGAAAGACAAAGAGACCGCGTGGATGGGTAATTGCAGACAATGAAAGACCATTAAGAATTGGAGTGCCACTTAGAGTAAGTTTTGTTGAATTTATTACAGCGGTCAATGGAAGCCACGAAAACATCCAAGGATATTGTGTTGATCTATTCAACGAAGCAAGAAAGCTGGTCCCGTATGACGTTCCTTACAGGTTTATACCTTTTGGAAATGGCTACAAGAATCCCAGTTATAATGATCTTGTGAAGAATGTGGCGAATGGTATATTTGATGCAGCTGTTGGAGATATTGCAATCATAACCAATCGCACAAGGATTGTGGATTTTTCTCAGCCTTTTGCTTCTACTGGTCTTGTTATTGTGGCTCCAATAAAAAATTCAAAGTCGAATGCTTGGGTGTTCCTTAAACCATTTACAGTAGAGATGTGGTGTGTTACCTCGGCGTCCTTTTTCATGATTGGGGCAGTCATATGGCTTCTTGAGCATCGAGTAAATGATGATTTCCGTGGTCCACCAAAGAGACAGCTTGTGACAGTAATACTGTTCAGCTTCTCAACATTGTTTAAAACAAATCAGGAAGAGACTGTAAGTCCACTTGGACGTATGGTAATGGTGGTGTGGCTTTTCTTATTGATGGTTATCACATCAAGCTACACAGCTAGTCTCACTTCAATCCTTACAGTTCAGCAACTTTCATCTCCCATAAAAGGACTTGATGACTTGATTACTAGTGAACAGCCAATTGGCTACCAGGTAGGATCGTTTGCTTATAGCTATCTTACCGAGAGTCTTTACATACCACAGTCGAGGCTTGTTTCTCTAGGCTCTCCAGAAGAGTATGAATTGGCACTGCTGAAGGGGCCATTCAAAAAAGGAGGGGTGGCAGCTGTTGTAGATGAACTTCCATATATGGAGTTATTCTTGTCAGGGAGGACTGATTTCGGAATGATCGGGCAGCCATTTACCAAGAGTGGATGGGGATTTGCTTTTCAGAGAGGATCTCCACTTGCGGTAGACATTTCTACTGCCATTTTAAAGCTTTCAGAGAATGGAAAGCTTCAGAAGATCCATGAGAAGTGGTTTTGCAAGATGGGTTGTCCTGGAGAGAGGAGAAGGAAATCTGAGCCCAACCAACTTCACTTGATCAGCTTCTGGGGTCTATATCTGTTGTGTGGTGCCTTTTCTCTCATTGCTCTTCTTATATTTCTTCTCCGCATAGTTCGACAATTTGCTCGCTACATTCGACAACAGAAGGAGTCTTCTCATCCCCAGTTGGTATCGTCGAACTCGAGCTGGACTCAGGTTATATATAAGTTCATCGACTTTGTTGATGAGAAGGAAGAAGCCATCAAGAGACTTTTCCGAAAGCATGATTCTCAGAATCCGGCTAACTGA 2736 41.01 MGNLLILTLISSIWAFLAGSACCQRPAVVNIGAVFTFDSVIGRAAKVAMEAAALDVNADPTILNGTKLNLIMADTHCNVLLGSIGAFQVLEKDVVAIVGPQSSVVAHMVLQIANNLQVPLISYAATDPTLSALQFPFFLRTTQSDSYQMTAMAELIDFYEWKEVIMIFVDDDYGRNGMSTLADELDKKMFKISYKIPLPSQFNLSEITDILNKSKLLGPRIYVVHVNPDPKLSIFKIAHQLNMMTSDYVWLATDWLSTTLDSILPTHQTSLNILQGVVVLRQHTPESSQKTRLWSRLRKMLPEVSSNSSLNVYALSAYDTIQLVARSIDKFLNEGRSITFSLKNKFHDLNTSKMPWGKLKIFDDGALLLSILLQTNFTGLSGQIEFNSDRNVVSRAYEVINIDQMGLRRVGYWSNIAGFTIQSPETLKQKQISSTHLNQTLGNITWPGGKTKRPRGWVIADNERPLRIGVPLRVSFVEFITAVNGSHENIQGYCVDLFNEARKLVPYDVPYRFIPFGNGYKNPSYNDLVKNVANGIFDAAVGDIAIITNRTRIVDFSQPFASTGLVIVAPIKNSKSNAWVFLKPFTVEMWCVTSASFFMIGAVIWLLEHRVNDDFRGPPKRQLVTVILFSFSTLFKTNQEETVSPLGRMVMVVWLFLLMVITSSYTASLTSILTVQQLSSPIKGLDDLITSEQPIGYQVGSFAYSYLTESLYIPQSRLVSLGSPEEYELALLKGPFKKGGVAAVVDELPYMELFLSGRTDFGMIGQPFTKSGWGFAFQRGSPLAVDISTAILKLSENGKLQKIHEKWFCKMGCPGERRRKSEPNQLHLISFWGLYLLCGAFSLIALLIFLLRIVRQFARYIRQQKESSHPQLVSSNSSWTQVIYKFIDFVDEKEEAIKRLFRKHDSQNPAN 911
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4357150 4363649 - MC02g0535 Mch2g0637 681559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0637 911 FunFam Glutamate receptor 704 812 - -
Mch2g0637 911 SUPERFAMILY Periplasmic binding protein-like II 442 808 - -
Mch2g0637 911 Gene3D - 475 577 - -
Mch2g0637 911 FunFam Glutamate receptor 578 708 - -
Mch2g0637 911 Pfam Bacterial extracellular solute-binding proteins, family 3 487 586 IPR001638 -
Mch2g0637 911 Gene3D - 578 710 - -
Mch2g0637 911 Gene3D - 144 418 - -
Mch2g0637 911 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 871 IPR015683 GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER)
Mch2g0637 911 FunFam Glutamate receptor 144 301 - -
Mch2g0637 911 CDD GluR_Plant 464 808 - -
Mch2g0637 911 Pfam Ligand-gated ion channel 809 839 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Mch2g0637 911 SMART GluR_14 467 810 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Mch2g0637 911 Pfam Receptor family ligand binding region 46 403 IPR001828 -
Mch2g0637 911 Gene3D - 47 394 - -
Mch2g0637 911 SUPERFAMILY Periplasmic binding protein-like I 22 458 IPR028082 -
Mch2g0637 911 FunFam Glutamate receptor 461 578 - -
Mch2g0637 911 Gene3D - 756 815 - -
Mch2g0637 911 PIRSF IGluLR_plant 1 911 IPR017103 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0637 Mch-Chr2:4357150 Mch4g0236 Mch-Chr4:1521252 0 dispersed
Mch2g0636 Mch-Chr2:4344135 Mch2g0637 Mch-Chr2:4357150 1.54E-304 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0637 K05387 - csv:101215715 1641.32