Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0640 ATGGGCTGCATCTGTTCCAAGGTTTTAGCGGATGAGTGTAGCAATCATGATAGCTCTAAAAATGCCTTTTCCTCCACAAAACGCCTCTCTGAGCTGAAAAAACCAAGAGTTGGTTCTCCAAAAATTGAGAAGATTTGGGAAAAGGAGAGACTGGAATGCGGAGATGTTACTGTTATGTTGTTCGATAAGAAGGCCAATGGTTCTCTGCGTTCATATGGCGAGCCTCCTAATGAGAGGAAGAAGGCGGAGATCCCTGATGTCACCATTTTCGACCATCCATGTATGGGAAGGATTCCGAAGGTTACCGAAGCCGAGCAGGTGGCTGCTGGGTGGCCGAGTTGGCTAGCTGTGGTTGCTGGTGAAGCTATCAAAGGCTGGTTGCCGAAACATGCGAGTAACTTCATCAAGTTAGAAAAAATTGGCCAAGGAACTTACAGCAGTGTATATAAAGCTCGTGATGTCATTCAAGATAAACTTGTGGCCTTGAAAAGAGTCAGGTTCGACAATCAAGATACCGAGAGCATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGCGAAAGCTCGATCATCCAAATATTGTTAAGTTGGAAGGTTTGATCACATCACAAACATCATGTACCATGTACCTTGTGTTTGAATATATGGAACATGATCTTACAGGACTTGCATCACGGCCTGGCACATCGTTCACCGAACCACAGATGAAGTGTTACATGAGGCAACTTTTGAGTGGACTTGATCACTGTCACAGCCATGGGGTTCTGCATCGAGACATAAAGGGCTCAAATCTTCTTATTGACAACAATGGCATTTTGAAGATAGCAGATTTTGGGTTGGCAGTCTTTTTTGATTCACAGTCAAAAGTTCCAATGACGAGCCGTGTAATCACTCTCTGGTATCGACCACCGGAACTTTTACTTGCAGCATCTCAATATGGTGCTGAAGTTGATTTATGGAGTGCTGGTTGCATTTTAGGAGAGTTATATGGGGGCAACCCTATCTTGCCAGGAAAAACAGAGGTTGAACAACTGCATAAGATATTTAAGCTCTGTGGTTCCCCGTCAAAGGAATGCTGGAGCAAATTGAATTTGAAGCATTCAACAGGCATGAAGCCACCGCAGTCATATGAAAGATGTCTTAGGGAGAGATTTAACGATTTTCCCCGTGCTGCAGTCGAGCTTATGGACACTTTGCTGTCTATAGATCCTGCAGGGCGAGGAACCGCAGCTTCTGCACTCAACAGTGAGTTCTTTACCACAAGGCCCTTACCCTGCGACCCTTCAAGTTTGCCAAAATACCCTCCCAGCAAGGAGATCGATTCAAAAATGCGCGAAGATGAAGCAAGAAGGCAAGGAGGAGCAGGTGGTGGGAGAAGCCGGACAATTGATCCTGAAGGAAAAGGACTGAAGCAATCTCGGGTAGTTCCTGCAGCAAAGCCTAATGCCGAGTTGGTTATATCACTACTGAGAAAACGAAATCATTCAAGCTTAAAGTACCGGAGCGAAACTTGTTCCTACGGTCTTGTGTCGAAGAGAGCCTCAAATTCAGGACCTATAACTCAGGGACCAAGATTAGCAAACTCCGAAAAGAACCTGAAATATACTTCCACCATTTCAAGCGGCTGTCTAACATCATCTGGGCCCATTGAATTCGTTTCTTACAAACATCTCCGAGAAAGAAATGGAGTTTCAAGGGCAGAATCAATAAGACAAGACAGAAATCGTCCTTTATCCAACGCTGCAGAAGAGTACATCAAAAAGCTGAACAGAGACCACCCTGATTTGAATAGAAGTCACAATCCTTGTCAGCTGGAAGATTCAAAAGCCTCAGCTCTGATTGTTGGCTAA 1848 44.59 MGCICSKVLADECSNHDSSKNAFSSTKRLSELKKPRVGSPKIEKIWEKERLECGDVTVMLFDKKANGSLRSYGEPPNERKKAEIPDVTIFDHPCMGRIPKVTEAEQVAAGWPSWLAVVAGEAIKGWLPKHASNFIKLEKIGQGTYSSVYKARDVIQDKLVALKRVRFDNQDTESIKFMAREILVLRKLDHPNIVKLEGLITSQTSCTMYLVFEYMEHDLTGLASRPGTSFTEPQMKCYMRQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGILKIADFGLAVFFDSQSKVPMTSRVITLWYRPPELLLAASQYGAEVDLWSAGCILGELYGGNPILPGKTEVEQLHKIFKLCGSPSKECWSKLNLKHSTGMKPPQSYERCLRERFNDFPRAAVELMDTLLSIDPAGRGTAASALNSEFFTTRPLPCDPSSLPKYPPSKEIDSKMREDEARRQGGAGGGRSRTIDPEGKGLKQSRVVPAAKPNAELVISLLRKRNHSSLKYRSETCSYGLVSKRASNSGPITQGPRLANSEKNLKYTSTISSGCLTSSGPIEFVSYKHLRERNGVSRAESIRQDRNRPLSNAAEEYIKKLNRDHPDLNRSHNPCQLEDSKASALIVG 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4391070 4394417 + MC02g0538 Mch2g0640 681562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0640 615 FunFam probable serine/threonine-protein kinase At1g54610 217 458 - -
Mch2g0640 615 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Mch2g0640 615 Gene3D Transferase(Phosphotransferase) domain 1 217 455 - -
Mch2g0640 615 Pfam Protein kinase domain 136 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0640 615 MobiDBLite consensus disorder prediction 437 453 - -
Mch2g0640 615 PANTHER CELL DIVISION PROTEIN KINASE 134 418 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Mch2g0640 615 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0640 615 CDD STKc_CDK9_like 134 418 - -
Mch2g0640 615 SMART serkin_6 134 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0640 615 MobiDBLite consensus disorder prediction 423 473 - -
Mch2g0640 615 SUPERFAMILY Protein kinase-like (PK-like) 129 426 IPR011009 -
Mch2g0640 615 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524(InterPro)
Mch2g0640 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0640 615 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0640 Mch-Chr2:4391070 Mch5g0670 Mch-Chr5:4518006 4.61E-188 dispersed
Mch2g0640 Mch-Chr2:4391070 Mch2g0641 Mch-Chr2:4396942 3.76E-202 tandem
Mch1g1786 Mch-Chr1:18173341 Mch2g0640 Mch-Chr2:4391070 6.85E-15 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77197 PF00069 Pkinase 1.20E-67 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0640 - - - 0.0