Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0641 ATGGGTTGCCAATGTTCCAAGCCTTCGGTTGATGAAGATGCCCGGGGCAGACCCACTGAGAAGTTGTCTTCACAAAAGGCTTCACGAGTAAATTTATCAAGAAAAGAGGAGGATGTGCGATTGAATTCTCTGAAAAGAGAGGAAGTTGTTCGAATAAATTCCTCACAGAGAGCAGATAGTATTCGATCAAAGGTGAAAACGGATGGAGGTGACATGAAAGTTGCTTTTTTGGACAAGAAAGTCAACGGCTCAAATAGGGTACACGACGATCAAATTGAAAAAAAGAAGAGGGAGAGGCTGGAAGCAGCCATTTCTGCTAATTATCCTGGAAAAGGAAGCATCCCAAAAGCTGTGGTAGCAGAGCAAGTTGCAGCTGGTTGGCCAAGCTGGCTCTCCTCTGTCGCAGGTGAAGCGCTGGAGGGATGGCTGCCACGAAAAGCCGAAACTTTCGAGAAATTAGACAAGATAGGACAGGGGACGTATAGTAGTGTTTACAAGGCTCGCGATATCGTTCATGGTAAACTAGTCGCTCTAAAACGAGTTCGATTCGATAATCTCGATGTGGAGAGCGTCAAGTTTATGGCCCGGGAAATCCTTATCCTTCGTAGGCTTGATCATCCAAATGTAATAAAATTGGAAGGCTTGATTACGTCGCCACGGTCATGTAGCTTATACCTTGTTTTTGAGTATATGGAGCATGATCTTACTGGTCTTGCATCTCGTCCCGGCGTCAAGTTCAGCGAACCACAGGTTAAATGCTATATGCAACAACTTCTAAGGGGACTCGATTACTGTCACAGTCATGGTGTCCTCCACCGTGATATTAAGGGTTCAAATCTCTTAATCGATGACAATGGTGCCTTGAAGATTGCAGATTTTGGATTAGCTAGTCCTTTTGACCCCCATAATCGTGTTGCCTTAACAAGCCGTGTAGTGACTCTATGGTACCGACCGCCCGAACTTCTGCTTGGAGCTTCCCATTATGGGGTTGCCGTGGACCTTTGGAGTACTGGTTGCGTACTGGCTGAACTATATGCTGGGAAGCCTATCTTACCTGGAAAAACTGAGGTCGAACAATTGCATAAGATATTTAAACTTTGTGGGTCGCCACCTGAGGATTACTGGAGGAGATTGCAGTTACCTCATTCAACTGCGTTCAAGACGGCTCAGCCATACCGACGTTGTATCGGAGAAATGCTCAAGGATTTCCCATCTGCTGCGGTGGCTCTTGTGGATAAATTGCTTTCTGTAGATCCTGCTCACAGAGGAACTGCAGCCGCTGCTCTAAAGAGTGAGTTTTTTACGACTAAACCTCTCGCTTGCGAGCCTTCGGGTATGCCCAAATATCCTCCCAGCAAAGAGATCGATGCAAAATTCCACGGCTGCAGAAGGCAGTCAAGAGCTGAGGGCAAAGACCCTAAAGACTACATGGAAGGAAGGCGACCTAAAGAAGCTCACCTTAACCTTGCTCTGAATGCTAAGGATGAAGCAAGCATGTTGATGCAGAAAAGGAAAGGCCATTCAAGTTTGAAGGGTCGAAGCAAAGCGTTGAATTCTCATGGGGACGAGACAGTTTCTGGTTTTCTGATTGCCCCACCCAAACAAAACCAATCTGTGACAGAAATTGGCAAAGATACATGCAGGTTTTCACATTCAGGACCGCTTATTAGCAAACCAGATTGGATGAAATCTGGGAAGCATTTCGATGACCATTCAATGGCACTTGATGGATCTAATCTCTCGGTCTTATCCCGTTTAGTAGCAACAAGGTCTACTATCACATCTGATCTTCCCTACGATAGACCTGGTCCGTCGCGATCAGAAGTAGGCAGATTGCCTGACTTTGTTAGGGAGTCGGAGCCAACGAGAAAGCAGGACTGTATATTTTATACACACCGAGTGGCAGATTCATACCAAATAGAGTATGAAAAGTCTTGTGCTAAAGAACAGACTCTGTTTGCTCATGGGACAGACATGAACAAGCTTTACACTTCCGGTCCAATCCTTGGTCCATCAAACAACTTAGACAAGCTGCTGAAAGAGCGAGACCGTCAGATTCAAGAATACGCTCGACAATCACGACACGGGAAAGTTGCTAACAGTCAGTTGAAGAGCGCAAGAGCAACAACCGGAAAACATTCGATGTCGATTCATGGAATGTGA 2163 45.82 MGCQCSKPSVDEDARGRPTEKLSSQKASRVNLSRKEEDVRLNSLKREEVVRINSSQRADSIRSKVKTDGGDMKVAFLDKKVNGSNRVHDDQIEKKKRERLEAAISANYPGKGSIPKAVVAEQVAAGWPSWLSSVAGEALEGWLPRKAETFEKLDKIGQGTYSSVYKARDIVHGKLVALKRVRFDNLDVESVKFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLVFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSHGVLHRDIKGSNLLIDDNGALKIADFGLASPFDPHNRVALTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCVLAELYAGKPILPGKTEVEQLHKIFKLCGSPPEDYWRRLQLPHSTAFKTAQPYRRCIGEMLKDFPSAAVALVDKLLSVDPAHRGTAAAALKSEFFTTKPLACEPSGMPKYPPSKEIDAKFHGCRRQSRAEGKDPKDYMEGRRPKEAHLNLALNAKDEASMLMQKRKGHSSLKGRSKALNSHGDETVSGFLIAPPKQNQSVTEIGKDTCRFSHSGPLISKPDWMKSGKHFDDHSMALDGSNLSVLSRLVATRSTITSDLPYDRPGPSRSEVGRLPDFVRESEPTRKQDCIFYTHRVADSYQIEYEKSCAKEQTLFAHGTDMNKLYTSGPILGPSNNLDKLLKERDRQIQEYARQSRHGKVANSQLKSARATTGKHSMSIHGM 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4396942 4401156 + MC02g0539 Mch2g0641 681563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0641 720 SMART serkin_6 150 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0641 720 MobiDBLite consensus disorder prediction 461 480 - -
Mch2g0641 720 MobiDBLite consensus disorder prediction 1 34 - -
Mch2g0641 720 MobiDBLite consensus disorder prediction 690 720 - -
Mch2g0641 720 Gene3D Phosphorylase Kinase; domain 1 137 232 - -
Mch2g0641 720 Gene3D Transferase(Phosphotransferase) domain 1 233 472 - -
Mch2g0641 720 MobiDBLite consensus disorder prediction 694 712 - -
Mch2g0641 720 ProSiteProfiles Protein kinase domain profile. 150 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0641 720 CDD STKc_CDK9_like 150 434 - -
Mch2g0641 720 FunFam probable serine/threonine-protein kinase At1g54610 137 232 - -
Mch2g0641 720 SUPERFAMILY Protein kinase-like (PK-like) 145 439 IPR011009 -
Mch2g0641 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0641 720 Pfam Protein kinase domain 150 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0641 720 PANTHER CELL DIVISION PROTEIN KINASE 149 434 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Mch2g0641 720 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524(InterPro)
Mch2g0641 720 FunFam probable serine/threonine-protein kinase At1g54610 233 472 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1090 Mch-Chr10:8041558 Mch2g0641 Mch-Chr2:4396942 6.86E-250 dispersed
Mch2g0641 Mch-Chr2:4396942 Mch5g0670 Mch-Chr5:4518006 3.14E-189 dispersed
Mch2g0640 Mch-Chr2:4391070 Mch2g0641 Mch-Chr2:4396942 3.76E-202 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77198 PF00069 Pkinase 2.40E-68 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0641 - - - 0.0