Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0654 CGGATGGTAATTGTATCACACATGCTTCCTGTAAAAGCAGAGCAAAGAGATGATGGAAATTGGAGTTTCAGTTGGGATGAGGATTCTTTGCTTTTCCAGATGAAGGATGGTTTTCCACAACAGATGGTCGTTTTTTACATCGGATGTCTGAGTTTGACAGTCGAAATTCATGAAGACAAACAACACGAGGTGTCCAAGACATTGCTAGAAGAATTCAACTGCTTTCCTACATTTTTGCCTCGTGAAATCTTGGACAAGTTTTACCATTGTTTCTGCAAGAGGTATCTGTGGTCTCTTTTCCATGACATGTTGCCTTTCTCTGTTGAGCACTCAGATCGGCCTTCGTGGGATGCGTATGTTTCAGCGAATATGTCGTTTTCGAAAAGAGTGATGGAAGTAGCTAACCCAGAACAAGATTATATTTGGATCCACGATTACCATTTAATGCTGCTTCCGTGCTTCTTAAGAGAGAGCTTCATCCGGATGAAGCTAGGATTTTTTCTTCACACCCCATTTCCTCCATCTGATATCTACCTAGCTCTTTCTGTAAGAGAAGAAATACTCACGTCTTTGCTGAACTGTGATGTCATCGGGTTCCACACGTATGATTACGCTCGACATTTCCTTTCGTGTTGCAGCCGAATTCTGGGCCTAGAACATAAGCTAGAGAAAGGCTTCCTTGAATTGGAGTACTATGGAAGGACTGTCAGGATAAAAGTTATGCCAGTTGGGATTCATATGGGCAGAATTGAGTCAATGATGAAAAGGGTAGAAGAGGATTCTCAGGTAGAGACTGTTATTAAAGATTACATTACTGGAAAGACGCTCATTTTAGGCATAGATGATGTCGACGTTTTCAAGGGTATCGATTTAAAATTTCTTGCAATGGAACACATGCTAATAGAGCGTCCTTATGTGCGGGGAACAGTCGTATTAGTCCAGATAATGAACCCTGCCAGAGGGAAAGGGATATATCATGATCAAATACTAGCTACGATAAGGGAAACCACCGAAAGAATAAACAAAGAATTCGAGCAGCCAAATTACCAACCAATCGTTCTCCTTGAATGTCCAGTTAGCACCAAAGAGAAGTTCTACTGTTATAGCATGGCCGAGTGCCTTGTTGTTACACCTTTAACGGATGGGATGAATCTTTATCCTTATGAATACATTGCCTCTAGACAGCATCAGGCCAGAAAGAGCATGTTAGTGATATCAGAATCTATGGGGTGTTCTTTATCACTGAGCGGAGCACTGCGTGTCAATCCATGGAATATCAGAGAAATTGCCGAGAAAATATACGAAGCAATTTCAATGTATGATTCAGAAAAACAGTCACGACATACGAAGCATTTTGAGTATATTAGCAACCATGATGTGGTTCACTGGTCAGCAAGTTTCTTTGAAGACATGAAGAGAACTTGGGATGAACAATGCCACAGGATATTCTGGGGAGTTAATCAAGGATTTCACTTCAGGGTTTTGTCTACTGATCTCATTTCTGAAAGGCTTCCATTAAATACCATGGAATTAGACTACAGAAAGGCAAAGACAAGGGCCATTCTTTTGGACTATGATAGCACATTTATTCCCCCATACTCTGCGGATAAGTCTCCAAGTGAGCGTATTATCTCAGCCCTCAACGATCTTTGTGCAGATAGTCTGAATCAAGTTGTAGTTGTTAGCGGAAGAGGAAGGGACAGCTTGAACAAGTGGTTCAAGTCTTGCAAAAATCTTGTAATAGCAGCAGAACATGGATTCTTCTTGAGGTTTCCAGGAAATGAAGAGTGGGAAACCATTGGTCAGAATTTGGATTTGAGTTGGATGGAGTTAGCAGAACGCACCATGGAATCATATACTGCTGCTACAGACGGTTCTTTCATCGAAAGGGAAGAACGCTCTCTGGTGTGGAACTATCAAAATGCAGACCCACGATTTGGATCTCTCCAAGCTATTGAGCTTGTGGATAATCTATCAGATGTTTTGGCCAATGATCCTGTTAGTATCAAGAGTGGAAATTACGTTGTGGAAGCAAAATCTCAGGGAGTCAACAAAGGCACAGTTGCAAAGATGATCCTCGAATCCATGGCAAAGAAAGAAGCGAAAGGGGACGAGTTTATCATGTGCATAGGCGATGACAAATTTGATGACGACATGTTTGAAATCCTTAATGCAGCAACAGTAGAAGGCAAACTTTCATCCCGCAGTCCAGTTTTCATATGTACTATTAATGAAAATCCAACCAAGGCCAAATATTATTTGAAAGGCACAAATGAAGTGATGGACGTTCTTGAACTTTTGGCTTTAGCATCC 2313 41.29 RMVIVSHMLPVKAEQRDDGNWSFSWDEDSLLFQMKDGFPQQMVVFYIGCLSLTVEIHEDKQHEVSKTLLEEFNCFPTFLPREILDKFYHCFCKRYLWSLFHDMLPFSVEHSDRPSWDAYVSANMSFSKRVMEVANPEQDYIWIHDYHLMLLPCFLRESFIRMKLGFFLHTPFPPSDIYLALSVREEILTSLLNCDVIGFHTYDYARHFLSCCSRILGLEHKLEKGFLELEYYGRTVRIKVMPVGIHMGRIESMMKRVEEDSQVETVIKDYITGKTLILGIDDVDVFKGIDLKFLAMEHMLIERPYVRGTVVLVQIMNPARGKGIYHDQILATIRETTERINKEFEQPNYQPIVLLECPVSTKEKFYCYSMAECLVVTPLTDGMNLYPYEYIASRQHQARKSMLVISESMGCSLSLSGALRVNPWNIREIAEKIYEAISMYDSEKQSRHTKHFEYISNHDVVHWSASFFEDMKRTWDEQCHRIFWGVNQGFHFRVLSTDLISERLPLNTMELDYRKAKTRAILLDYDSTFIPPYSADKSPSERIISALNDLCADSLNQVVVVSGRGRDSLNKWFKSCKNLVIAAEHGFFLRFPGNEEWETIGQNLDLSWMELAERTMESYTAATDGSFIEREERSLVWNYQNADPRFGSLQAIELVDNLSDVLANDPVSIKSGNYVVEAKSQGVNKGTVAKMILESMAKKEAKGDEFIMCIGDDKFDDDMFEILNAATVEGKLSSRSPVFICTINENPTKAKYYLKGTNEVMDVLELLALAS 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4478704 4481245 - MC02g0552 Mch2g0654 681576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0654 771 NCBIfam trehalose-phosphatase 516 768 IPR003337 GO:0005992(InterPro)
Mch2g0654 771 Pfam Trehalose-phosphatase 522 756 IPR003337 GO:0005992(InterPro)
Mch2g0654 771 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 648 771 - -
Mch2g0654 771 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 768 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Mch2g0654 771 Gene3D - 521 726 IPR023214 -
Mch2g0654 771 Gene3D - 602 681 - -
Mch2g0654 771 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 476 - -
Mch2g0654 771 FunFam Alpha,alpha-trehalose-phosphate synthase 253 456 - -
Mch2g0654 771 Gene3D Glycogen Phosphorylase B; 253 456 - -
Mch2g0654 771 Pfam Glycosyltransferase family 20 2 472 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Mch2g0654 771 CDD HAD_TPP 520 761 - -
Mch2g0654 771 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 518 635 - -
Mch2g0654 771 FunFam Trehalose-6-phosphate synthase 8 1 252 - -
Mch2g0654 771 SUPERFAMILY HAD-like 519 768 IPR036412 -
Mch2g0654 771 CDD GT20_TPS 1 472 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Mch2g0654 771 NCBIfam HAD-IIB family hydrolase 521 726 IPR006379 -
Mch2g0654 771 Gene3D Glycogen Phosphorylase B; 1 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0654 Mch-Chr2:4478704 Mch6g0163 Mch-Chr6:1098180 8.27E-282 dispersed
Mch2g0654 Mch-Chr2:4478704 Mch4g0135 Mch-Chr4:891787 6.65e-319 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0654 K16055 - vvi:100265140 890.567