Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0654 | CGGATGGTAATTGTATCACACATGCTTCCTGTAAAAGCAGAGCAAAGAGATGATGGAAATTGGAGTTTCAGTTGGGATGAGGATTCTTTGCTTTTCCAGATGAAGGATGGTTTTCCACAACAGATGGTCGTTTTTTACATCGGATGTCTGAGTTTGACAGTCGAAATTCATGAAGACAAACAACACGAGGTGTCCAAGACATTGCTAGAAGAATTCAACTGCTTTCCTACATTTTTGCCTCGTGAAATCTTGGACAAGTTTTACCATTGTTTCTGCAAGAGGTATCTGTGGTCTCTTTTCCATGACATGTTGCCTTTCTCTGTTGAGCACTCAGATCGGCCTTCGTGGGATGCGTATGTTTCAGCGAATATGTCGTTTTCGAAAAGAGTGATGGAAGTAGCTAACCCAGAACAAGATTATATTTGGATCCACGATTACCATTTAATGCTGCTTCCGTGCTTCTTAAGAGAGAGCTTCATCCGGATGAAGCTAGGATTTTTTCTTCACACCCCATTTCCTCCATCTGATATCTACCTAGCTCTTTCTGTAAGAGAAGAAATACTCACGTCTTTGCTGAACTGTGATGTCATCGGGTTCCACACGTATGATTACGCTCGACATTTCCTTTCGTGTTGCAGCCGAATTCTGGGCCTAGAACATAAGCTAGAGAAAGGCTTCCTTGAATTGGAGTACTATGGAAGGACTGTCAGGATAAAAGTTATGCCAGTTGGGATTCATATGGGCAGAATTGAGTCAATGATGAAAAGGGTAGAAGAGGATTCTCAGGTAGAGACTGTTATTAAAGATTACATTACTGGAAAGACGCTCATTTTAGGCATAGATGATGTCGACGTTTTCAAGGGTATCGATTTAAAATTTCTTGCAATGGAACACATGCTAATAGAGCGTCCTTATGTGCGGGGAACAGTCGTATTAGTCCAGATAATGAACCCTGCCAGAGGGAAAGGGATATATCATGATCAAATACTAGCTACGATAAGGGAAACCACCGAAAGAATAAACAAAGAATTCGAGCAGCCAAATTACCAACCAATCGTTCTCCTTGAATGTCCAGTTAGCACCAAAGAGAAGTTCTACTGTTATAGCATGGCCGAGTGCCTTGTTGTTACACCTTTAACGGATGGGATGAATCTTTATCCTTATGAATACATTGCCTCTAGACAGCATCAGGCCAGAAAGAGCATGTTAGTGATATCAGAATCTATGGGGTGTTCTTTATCACTGAGCGGAGCACTGCGTGTCAATCCATGGAATATCAGAGAAATTGCCGAGAAAATATACGAAGCAATTTCAATGTATGATTCAGAAAAACAGTCACGACATACGAAGCATTTTGAGTATATTAGCAACCATGATGTGGTTCACTGGTCAGCAAGTTTCTTTGAAGACATGAAGAGAACTTGGGATGAACAATGCCACAGGATATTCTGGGGAGTTAATCAAGGATTTCACTTCAGGGTTTTGTCTACTGATCTCATTTCTGAAAGGCTTCCATTAAATACCATGGAATTAGACTACAGAAAGGCAAAGACAAGGGCCATTCTTTTGGACTATGATAGCACATTTATTCCCCCATACTCTGCGGATAAGTCTCCAAGTGAGCGTATTATCTCAGCCCTCAACGATCTTTGTGCAGATAGTCTGAATCAAGTTGTAGTTGTTAGCGGAAGAGGAAGGGACAGCTTGAACAAGTGGTTCAAGTCTTGCAAAAATCTTGTAATAGCAGCAGAACATGGATTCTTCTTGAGGTTTCCAGGAAATGAAGAGTGGGAAACCATTGGTCAGAATTTGGATTTGAGTTGGATGGAGTTAGCAGAACGCACCATGGAATCATATACTGCTGCTACAGACGGTTCTTTCATCGAAAGGGAAGAACGCTCTCTGGTGTGGAACTATCAAAATGCAGACCCACGATTTGGATCTCTCCAAGCTATTGAGCTTGTGGATAATCTATCAGATGTTTTGGCCAATGATCCTGTTAGTATCAAGAGTGGAAATTACGTTGTGGAAGCAAAATCTCAGGGAGTCAACAAAGGCACAGTTGCAAAGATGATCCTCGAATCCATGGCAAAGAAAGAAGCGAAAGGGGACGAGTTTATCATGTGCATAGGCGATGACAAATTTGATGACGACATGTTTGAAATCCTTAATGCAGCAACAGTAGAAGGCAAACTTTCATCCCGCAGTCCAGTTTTCATATGTACTATTAATGAAAATCCAACCAAGGCCAAATATTATTTGAAAGGCACAAATGAAGTGATGGACGTTCTTGAACTTTTGGCTTTAGCATCC | 2313 | 41.29 | RMVIVSHMLPVKAEQRDDGNWSFSWDEDSLLFQMKDGFPQQMVVFYIGCLSLTVEIHEDKQHEVSKTLLEEFNCFPTFLPREILDKFYHCFCKRYLWSLFHDMLPFSVEHSDRPSWDAYVSANMSFSKRVMEVANPEQDYIWIHDYHLMLLPCFLRESFIRMKLGFFLHTPFPPSDIYLALSVREEILTSLLNCDVIGFHTYDYARHFLSCCSRILGLEHKLEKGFLELEYYGRTVRIKVMPVGIHMGRIESMMKRVEEDSQVETVIKDYITGKTLILGIDDVDVFKGIDLKFLAMEHMLIERPYVRGTVVLVQIMNPARGKGIYHDQILATIRETTERINKEFEQPNYQPIVLLECPVSTKEKFYCYSMAECLVVTPLTDGMNLYPYEYIASRQHQARKSMLVISESMGCSLSLSGALRVNPWNIREIAEKIYEAISMYDSEKQSRHTKHFEYISNHDVVHWSASFFEDMKRTWDEQCHRIFWGVNQGFHFRVLSTDLISERLPLNTMELDYRKAKTRAILLDYDSTFIPPYSADKSPSERIISALNDLCADSLNQVVVVSGRGRDSLNKWFKSCKNLVIAAEHGFFLRFPGNEEWETIGQNLDLSWMELAERTMESYTAATDGSFIEREERSLVWNYQNADPRFGSLQAIELVDNLSDVLANDPVSIKSGNYVVEAKSQGVNKGTVAKMILESMAKKEAKGDEFIMCIGDDKFDDDMFEILNAATVEGKLSSRSPVFICTINENPTKAKYYLKGTNEVMDVLELLALAS | 771 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4478704 | 4481245 | - | MC02g0552 | Mch2g0654 | 681576 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0654 | 771 | NCBIfam | trehalose-phosphatase | 516 | 768 | IPR003337 | GO:0005992(InterPro) | |
Mch2g0654 | 771 | Pfam | Trehalose-phosphatase | 522 | 756 | IPR003337 | GO:0005992(InterPro) | |
Mch2g0654 | 771 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 648 | 771 | - | - | |
Mch2g0654 | 771 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 1 | 768 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER) | |
Mch2g0654 | 771 | Gene3D | - | 521 | 726 | IPR023214 | - | |
Mch2g0654 | 771 | Gene3D | - | 602 | 681 | - | - | |
Mch2g0654 | 771 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 1 | 476 | - | - | |
Mch2g0654 | 771 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 253 | 456 | - | - | |
Mch2g0654 | 771 | Gene3D | Glycogen Phosphorylase B; | 253 | 456 | - | - | |
Mch2g0654 | 771 | Pfam | Glycosyltransferase family 20 | 2 | 472 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Mch2g0654 | 771 | CDD | HAD_TPP | 520 | 761 | - | - | |
Mch2g0654 | 771 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 518 | 635 | - | - | |
Mch2g0654 | 771 | FunFam | Trehalose-6-phosphate synthase 8 | 1 | 252 | - | - | |
Mch2g0654 | 771 | SUPERFAMILY | HAD-like | 519 | 768 | IPR036412 | - | |
Mch2g0654 | 771 | CDD | GT20_TPS | 1 | 472 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Mch2g0654 | 771 | NCBIfam | HAD-IIB family hydrolase | 521 | 726 | IPR006379 | - | |
Mch2g0654 | 771 | Gene3D | Glycogen Phosphorylase B; | 1 | 252 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0654 | Mch-Chr2:4478704 | Mch6g0163 | Mch-Chr6:1098180 | 8.27E-282 | dispersed | |
Mch2g0654 | Mch-Chr2:4478704 | Mch4g0135 | Mch-Chr4:891787 | 6.65e-319 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch2g0654 | K16055 | - | vvi:100265140 | 890.567 |