Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0690 ATGCGGCGAGGCAGACCCTCAGATCCATTTACAGCGAGAGAAGTGCCAAAATCGACCGTGCAGCCCGAGAATCCTCTCAAAGAGATCCGATACAGAGGCGTTCGGAAGCGTCCTTGGGGGAGATACGCCGCTGAGATCAGAGATCCCTGGAAGAAGACTAGGGTTTGGCTCGGCACCTTCGATTCCGCCGAGGAAGCCGCTCGGGCGTACGATACTGCCGCTCGCTCTCTCCGTGGAGCCAAGGCCAAAACTAACTTCCCCTTACATCCATCCGCGATTTCGATTCAGCAACAGATTCCGTTTTACCAATCGACGCCGGATTTGCACGATTCGAACGCTTTTGGCAAGATTGACTGTGTGCAGGCCAATCGGCCTACGTCCAGCAGCTTGAGTTCCACCGTGGAGTCGTTTAGCGGGCCGCGGATTTCTAATCCCCTGTCGTCGCTGTCGATGGTTCGACGGAGGCCGGTGCAGCCAGTTTCGCCGGACGACTGCCATAGCGACTGCGATTCGTCGTCCTCGGTTGTCGATGATGATGAGGTCTGTGTGCTTGCTTCTTTCCGTAGAGCCTTGCCGTTCGATCTTAACCTACCGCCTCCGATGGACGTCGTGGATTTAACCGGTGATGATCTTCAAGCCACTGCTTTATGCCTCTGA 657 55.86 MRRGRPSDPFTAREVPKSTVQPENPLKEIRYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEEAARAYDTAARSLRGAKAKTNFPLHPSAISIQQQIPFYQSTPDLHDSNAFGKIDCVQANRPTSSSLSSTVESFSGPRISNPLSSLSMVRRRPVQPVSPDDCHSDCDSSSSVVDDDEVCVLASFRRALPFDLNLPPPMDVVDLTGDDLQATALCL 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4735721 4738019 + MC02g0585 Mch2g0690 681612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0690 218 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0690 218 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0690 218 SMART rav1_2 30 93 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0690 218 Pfam AP2 domain 30 79 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0690 218 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 181 - -
Mch2g0690 218 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677(InterPro)
Mch2g0690 218 CDD AP2 30 87 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0690 218 MobiDBLite consensus disorder prediction 148 174 - -
Mch2g0690 218 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0690 218 FunFam Ethylene-responsive transcription factor 2 30 89 - -
Mch2g0690 218 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch2g0690 218 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1359 Mch-Chr10:12158064 Mch2g0690 Mch-Chr2:4735721 1.60E-61 dispersed
Mch11g1046 Mch-Chr11:7283457 Mch2g0690 Mch-Chr2:4735721 1.16E-31 dispersed
Mch1g1885 Mch-Chr1:18852806 Mch2g0690 Mch-Chr2:4735721 1.40E-32 dispersed
Mch2g0690 Mch-Chr2:4735721 Mch4g0138 Mch-Chr4:914688 4.19E-32 dispersed
Mch1g2190 Mch-Chr1:21007996 Mch2g0690 Mch-Chr2:4735721 6.27E-34 transposed
Mch2g0690 Mch-Chr2:4735721 Mch3g1111 Mch-Chr3:14514950 7.10E-31 wgd
Mch2g0690 Mch-Chr2:4735721 Mch4g0091 Mch-Chr4:600449 9.56E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42900 PF00847 AP2 8.20E-14 CL0081 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0690 K09286 - csv:101221703 386.726