Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch2g0710 | GGAAAGTCGACACTTACAGATTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAAGTTGCTGGTGATGTGCGGATGACAGACACTCGCCAAGATGAGGCAGAGCGTGGTATCACCATTAAATCTACTGGCATCTCCCTCTATTATGAGATGTCTGATGAATCATTGAAAAGTTACAAGGGAGAGAGACAGGGAAATGAATATCTCATCAATCTTATTGATTCACCTGGACATGTTGACTTCTCATCTGAGGTTACAGCTGCTCTACGTATTACTGATGGTGCCCTTGTTGTGGTGGACTGCATTGAAGGTGTTTGTGTCCAAACAGAGACCGTGCTTCGTCAGGCTTTGGGAGAGAGGATTAGACCTGTCTTGACTGTTAACAAGATGGACAGGTGCTTCCTTGAACTTCAAGTGGATGGAGAAGAGGCTTACCAAACATTCCAGAGGGTTATAGAGAATGCTAATGTGATTATGGCCACATATGAAGATCCCCTTCTTGGTGACGTGCAAGTGTACCCAGAGAAAGGAACAGTAGCTTTCTCTGCTGGTTTGCATGGTTGGGCGTTTACCCTGACTAACTTCGCAAAGATGTATGCCTCCAAGTTTGGAGTAGATGAGTCAAAGATGATGGAGAGACTTTGGGGTGAGAATTTCTTCGATCCTGCGACCAAGAAATGGACCAGCAAGAACACTGGCTCTGGAACATGCAAACGTGGATTTGTCCAGTTCTGCTACGAACCTATCAAGCAGATAATTGCAACTTGCATGAATGATCAGAAGGATAAGCTATGGCCAATGTTGCAGAAGCTTGGAGTTGTCATGAAGTCCGATGAAAAGGAGTTGATGGGTAAAGCACTAATGAAGCGTGTGATGCAAACATGGCTTCCAGCTAGCACCGCCCTCTTGGAAATGATGATCTTTCATCTTCCTTCCCCTGCAAAGGCCCAAAAATATCGTGTTGAGAATTTGTACGAGGGTCCACTAGATGACGCTTACGCTAGTGCCATTAGAAATTGTGATCCGGAGGGACCTCTTATGCTTTATGTCTCAAAAATGATTCCTGCATCAGACAAGGGTAGATTCTTTGCCTTTGGTCGAGTCTTTTCTGGGAAAGTTTCAACTGGTTTGAAAGTTAGAATCATGGGTCCAAACTATGTTCCTGGAGAAAAGAAAGACCTGTACGTGAAGAGTGTCCAGAGAACTGTCATTTGGATGGGAAAGAGGCAAGAAACGGTGGAGGACGTGCCTTGTGGTAATACAGTTGCCATGGTTGGGTTGGACCAATTTATCACCAAGAATGCCACTCTGACAAACGAGAAGGAAGTTGATGCTCATCCAATTCGAGCCATGAAATTTTCTGTATCGCCTGTTGTTCGTGTGGCTGTTCAGTGCAAAGTGGCATCTGATCTTCCCAAGCTAGTGGAAGGCCTTAAACGTCTGGCGAAATCAGACCCTATGGTTGTGTGTACCATGGAGGAATCTGGTGAGCACATTGTTGCCGGTGCTGGAGAACTTCACCTTGAGATCTGTCTCAAGGATTTGCAAGACGACTTCATGGGTGGAGCTGAGATCATAAAATCTGATCCCGTCGTCTCTTTCCGTGAAACTGTCCTTGAGAGGTCCTGCCGCACANTGATCTGTCTCAAGGATTTGCAAGACGACTTCATGGGTGGAGCTGAGATCATAAAATCTGATCCCGTCGTCTCTTTCCGTGAAACTGTCCTTGAGAGGTCCTGCCGCACAGTGATGAGTAAATCCCCCAACAAACACAATCGTCTGTACATGGAAGCACGCCCCTTGGAGGATGGACTGGCAGAGGCTATTGACGATGGCCGCATTGGCCCACGAGATGATCCTAAAGTGCGTTCCAAAATTTTATCGGAGGAATTTGGTTGGGATAAAGATCTTGCTAAGAAGATCTGGTGCTTTGGCCCTGAGACTCTTGGACCTAATATGGTGGTTGATATGTGTAAGGGAGTTCAATATCTGAACGAAATCAAGGATTCCGTGGTTGCTGGTTTCCAATGGGCGTCGAAAGAAGGTGCGTTGGCTGAAGAAAACATGAGAGGCATCTGTTTTGAAGTGTGCGATGTGGTTCTCCATGCTGATGCCATCCACAGAGGTGGTGGTCAGGTGATTCCCACTGCCAGGAGGGTAATATACGCATCTCAGATCACAGCCAAACCCAGACTTCTTGAGCCAGTCTACTTGGTGGAAATTCAGGCTCCCGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTTAACCAGAAGCGTGGACATGTCTTCGAGGAGATGCAGAGGCCCGGCACCCCTCTTTACAACATTAAGGCATATCTCCCCGTTATTGAGTCCTTTGGGTTCTCGAGCACGCTGAGGGCTGCAACTTCCGGGCAGGCATTCCCACAGTGCGTTTTTGACCATTGGGACATGATGTCGTCGGATCCATTG | 2451 | 47.08 | GKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGSGTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSDEKELMGKALMKRVMQTWLPASTALLEMMIFHLPSPAKAQKYRVENLYEGPLDDAYASAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTXICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETLGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQITAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPL | 817 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 4845478 | 4847930 | + | MC02g0604 | Mch2g0710 | 681632 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch2g0710 | 817 | FunFam | Translation elongation factor 2 | 576 | 729 | - | - | |
| Mch2g0710 | 817 | FunFam | Translation elongation factor 2 | 1 | 207 | - | - | |
| Mch2g0710 | 817 | Gene3D | - | 577 | 726 | IPR014721 | - | |
| Mch2g0710 | 817 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 1 | 314 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Mch2g0710 | 817 | SMART | EFG_C_a | 731 | 817 | IPR000640 | - | |
| Mch2g0710 | 817 | NCBIfam | small GTP-binding protein domain | 1 | 146 | IPR005225 | GO:0005525(InterPro) | |
| Mch2g0710 | 817 | SMART | EFG_IV_2 | 613 | 729 | IPR005517 | GO:0005525(InterPro) | |
| Mch2g0710 | 817 | PRINTS | GTP-binding elongation factor signature | 87 | 98 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Mch2g0710 | 817 | PRINTS | GTP-binding elongation factor signature | 35 | 43 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Mch2g0710 | 817 | PRINTS | GTP-binding elongation factor signature | 123 | 132 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Mch2g0710 | 817 | PRINTS | GTP-binding elongation factor signature | 71 | 81 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Mch2g0710 | 817 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 456 | 533 | - | - | |
| Mch2g0710 | 817 | Gene3D | - | 1 | 195 | IPR027417 | - | |
| Mch2g0710 | 817 | CDD | EF2_II | 345 | 440 | - | - | |
| Mch2g0710 | 817 | CDD | EF2 | 1 | 200 | - | - | |
| Mch2g0710 | 817 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 1 | 545 | - | GO:0003746(PANTHER)|GO:0003924(PANTHER)|GO:0005829(PANTHER)|GO:0006414(PANTHER)|GO:0043022(PANTHER)|GO:1990904(PANTHER) | |
| Mch2g0710 | 817 | Pfam | Elongation factor G, domain IV | 617 | 728 | IPR005517 | GO:0005525(InterPro) | |
| Mch2g0710 | 817 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 569 | 733 | IPR020568 | - | |
| Mch2g0710 | 817 | CDD | eEF2_snRNP_like_C | 734 | 812 | - | - | |
| Mch2g0710 | 817 | FunFam | Translation elongation factor 2 | 313 | 454 | - | - | |
| Mch2g0710 | 817 | FunFam | Translation elongation factor 2 | 730 | 817 | - | - | |
| Mch2g0710 | 817 | CDD | EF2_snRNP_III | 457 | 529 | - | - | |
| Mch2g0710 | 817 | Gene3D | Translation factors | 313 | 454 | - | - | |
| Mch2g0710 | 817 | Pfam | Elongation factor Tu domain 2 | 364 | 432 | IPR004161 | GO:0005525(InterPro) | |
| Mch2g0710 | 817 | SUPERFAMILY | EF-G C-terminal domain-like | 454 | 530 | IPR035647 | - | |
| Mch2g0710 | 817 | SUPERFAMILY | EF-G C-terminal domain-like | 734 | 816 | IPR035647 | - | |
| Mch2g0710 | 817 | SUPERFAMILY | Translation proteins | 312 | 446 | IPR009000 | - | |
| Mch2g0710 | 817 | Pfam | Elongation Factor G, domain III | 457 | 519 | IPR041095 | - | |
| Mch2g0710 | 817 | FunFam | Elongation factor 2 | 192 | 296 | - | - | |
| Mch2g0710 | 817 | Pfam | Elongation factor Tu GTP binding domain | 1 | 197 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Mch2g0710 | 817 | CDD | aeEF2_snRNP_like_IV | 566 | 738 | - | - | |
| Mch2g0710 | 817 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 28 | 43 | IPR031157 | - | |
| Mch2g0710 | 817 | Gene3D | Yeast translation eEF2 (G' domain) | 196 | 296 | - | - | |
| Mch2g0710 | 817 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 311 | IPR027417 | - | |
| Mch2g0710 | 817 | Pfam | Elongation factor G C-terminus | 731 | 816 | IPR000640 | - | |
| Mch2g0710 | 817 | FunFam | Translation elongation factor 2 | 456 | 533 | - | - | |
| Mch2g0710 | 817 | Gene3D | - | 727 | 817 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch2g0710 | Mch-Chr2:4845478 | Mch2g0732 | Mch-Chr2:4997240 | 0 | dispersed | |
| Mch2g0710 | Mch-Chr2:4845478 | Mch2g0711 | Mch-Chr2:4849705 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch2g0710 | K03234 | - | csv:101209544 | 1526.15 |