Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0711 ATGGATGCTCATGTGCGAGCTCGTTTCACACTTGGCAAACAGTCCTCGCTCAGGCCAGCGCGTGAAGGCTCAGGTGTGGTTGCCGAGGAGCTCGATGATCCGATCGCGATTGATCCTGGGATTAAGCTCATGTACCTGGCAAATGACGGCGACGTGGATGGGATTAGGGAGCTACTGGATTCGGGCACCGACGTGAATTTTCACGACAGCGATGGCCGAACCTCGTTGCATGTTGCTGCTTGTCAGGGCAGGCCAGACGTTGTTGAGTTGCTACTCAGAAGGGGTGCGGAGGTCGACGTTGAGGACTGCTGGGGCAGCACGCCTCTTGCAGATGCCATACATTACCAGAATCATGATGTGATCAAACTCTTACAGAAACATGGTGCAAAGCCACAGGTGGCTCCAATGCGTGTGCAAAATGATCGTGAAGTTCCTGAGTATGAGATCAATCCAAATGAGCTTGATTTTTCTAAACGTGTCAACATTACAAAAGGAACTTTCTGCATTGCGTCATGGCGTGGAACTGAAGTTGCCGTGAAGACACTAGGCAAGGAAGTTTTCACTGATGAGGATAAAGTGAAAGCATTTAGGGATGAACTTGCTTTACTTCAGAAGATACGCCATCCTAATGTTGTCCAATTTCTTGGAGCTGTAACACAAAGTAGCCCAATGATGATTGTCACAGAGTATTTACCCCAGGGGGACCTTGATGCATTCATGAAACAAAAAGGTTCCTTGAAGCTAGCAACAGCTGTAAAGTTCGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAGCATAAACCTGAAGCAATAGTCCATCGTGATCTTGAACCTTCAAACATACTGCGGGATGATTCTGGGCACCTGAAAGTTGCAGACTTTGGAGTAAGCAAACTTCTAAAAGTTTCAAAAGGGGTCAAAGAAGACAGACCTGTGACATGTCACGACACTTCATGCCGATATGTGGCACCGGAGGTTTACAAAAATGAAGAATATGATACGAGAGTGGATGTATTTTCATTTGCTTTGATCTTGCAAGAGGTGAAGTTTACAGCTGAAGAGCTTCGTCGGATTATGGACTATAAGCACAACATTCGTAATATGTCTGTTATTGCTCATGTCGATCATGGGAAGTCAACACTTACAGATTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAAGTTGCTGGTGATGTGCGGATGACAGACACTCGCCAAGATGAGGCAGAGCGTGGTATCACCATTAAATCTACTGGAATCTCCCTCTATTATGAGATGTCTGACGAATCATTGAAAAGTTACAAGGGAGAGAGACAGGGAAACGAGTATCTTATCAATCTTATTGATTCACCTGGACATGTCGACTTCTCATCTGAGGTTACAGCAGCTCTACGTATTACTGATGGTGCCCTTGTTGTGGTGGATTGCATAGAAGGTGTTTGTGTGCAAACAGAGACTGTGCTCCGTCAGGCTTTGGGAGAGAGGATTAGACCCGTCTTGACTGTTAACAAGATGGATAGGTGCTTCCTTGAACTTCAAGTGGATGGAGAAGAGGCTTACCAAACGTTCCAGAGGGTTATAGAGAATGCTAATGTGATTATGGCCACATACGAGGATCCCCTTCTTGGCGACGTGCAAGTGTACCCGGAGAAAGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGGTGGGCATTTACCCTGACTAACTTTGCAAAGATGTATGCCTCCAAGTTTGGAGTAGACGAGGCAAAGATGATGGAGAGACTTTGGGGTGAGAGTTTCTTCGATCCTGCAACCAAGAAATGGACCAGCAAGAACACTGGCTCTGGAACATGCAAACGTGGATTTGTCCAGTTCTGCTACGAACCTATCAAGCAGATAATTGCAACTTGCATGAATGACCAGAAGGATAAGCTATGGCCAATGTTGCAGAAGCTTGGAGTTGTCATGAAGTCTGATGAAAAGGAGTTGATGGGTAAAGCACTGATGAAGCGTGTGATGCAAACATGGCTTCCAGCTAGCACCGCCCTCTTGGAAATGATGATCTTTCATCTTCCTTCCCCTGCAAAGGCCCAAAAGTATCGTGTCGAGAATTTGTACGAGGGTCCACTAGATGACGCATATGCTAGTGCCATTAGAAATTGTGACCCAGAGGGACCTCTTATGCTTTACGTCTCAAAAATGATTCCTGCATCAGACAAGGGTAGATTCTTTGCCTTTGGTCGAGTCTTCTCTGGGAAAGTTTCAACTGGTTTGAAAGTTAGAATCATGGGTCCAAACTACGTTCCTGGAGAAAAGAAAGACCTGTACGTGAAGAGTGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACGGTGGAGGATGTGCCTTGTGGTAATACAGTTGCCATGGTTGGGTTGGACCAATTTATCACCAAGAATGCCACACTGACAAACGAGAAGGAAGTTGATGCTCATCCAATTCGAGCCATGAAATTTTCTGTATCGCCTGTTGTTCGTGTGGCTGTTCAGTGCAAGGTGGCATCTGATCTTCCCAAGCTAGTGGAAGGCCTTAAACGTCTGGCAAAATCAGACCCTATGGTCGTGTGTACCATGGAGGAATCTGGTGAGCACATTGTTGCCGGTGCTGGAGAACTTCACCTGGAGATCTGTCTCAAGGATTTGCAAGACGACTTTATGGGTGGAGCTGAGATCATAAAATCTGATCCTGTCGTCTCCTTCCGTGAAACTGTCCTTGAGAGGTCATGCCGCACAGTGATGAGTAAATCCCCCAACAAACACAATCGTCTGTACATGGAAGCACGCCCTTTGGAAGATGGACTGGCAGAGGCTATTGATGATGGCCGCATTGGCCCACGAGATGATCCTAAAGTACGTTCTAAAATTTTATCGGAGGAATTTGGTTGGGACAAAGATCTTGCTAAGAAGATCTGGTGTTTTGGTCCTGAGACTCTTGGACCCAATATGGTGGTTGATATGTGTAAGGGAGTACAATACCTGAATGAAATCAAGGATTCTGTGGTCGCTGGTTTCCAATGGGCGTCAAAAGAAGGTGCACTGGCTGAAGAAAACATGAGAGGCATCTGTTTTGAAGTATGTGATGTGGTCCTTCACGCTGATGCCATCCACAGAGGAGGTGGTCAAGTCATTCCAACTGCTAGGAGGGTAATATATGCTTCTCAGTTGACTGCGAAACCAAGGCTTCTTGAGCCAGTGTACCTGGTGGAGATTCAGGCTCCGGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTTAACCAGAAGCGTGGACATGTCTTTGAGGAGATGCAGAGGCCCGGAACCCCTCTTTACAACATCAAGGCATATCTCCCTGTTATTGAGTCCTTTGGGTTCTCGAGCACGCTGAGGGCTGCAACTTCCGGACAGGCATTCCCACAGTGTGTTTTTGACCATTGGGACATGATGTCGTCGGATCCATTAGAATCTGGTTCTCAGGCTGCTCAGCTAGTCGCAGATATCCGCAAGAGGAAGGGGTTGAAGGAGCAAATGACCCCACTCTCTGAGTTCGAGGACAAGCTGTAA 3576 46.73 MDAHVRARFTLGKQSSLRPAREGSGVVAEELDDPIAIDPGIKLMYLANDGDVDGIRELLDSGTDVNFHDSDGRTSLHVAACQGRPDVVELLLRRGAEVDVEDCWGSTPLADAIHYQNHDVIKLLQKHGAKPQVAPMRVQNDREVPEYEINPNELDFSKRVNITKGTFCIASWRGTEVAVKTLGKEVFTDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLDAFMKQKGSLKLATAVKFALDIARGMNYLHEHKPEAIVHRDLEPSNILRDDSGHLKVADFGVSKLLKVSKGVKEDRPVTCHDTSCRYVAPEVYKNEEYDTRVDVFSFALILQEVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGESFFDPATKKWTSKNTGSGTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSDEKELMGKALMKRVMQTWLPASTALLEMMIFHLPSPAKAQKYRVENLYEGPLDDAYASAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETLGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL 1191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4849705 4864527 + MC02g0605 Mch2g0711 681633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0711 1191 PRINTS GTP-binding elongation factor signature 465 476 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch2g0711 1191 PRINTS GTP-binding elongation factor signature 413 421 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch2g0711 1191 PRINTS GTP-binding elongation factor signature 449 459 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch2g0711 1191 PRINTS GTP-binding elongation factor signature 501 510 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch2g0711 1191 PRINTS GTP-binding elongation factor signature 369 382 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch2g0711 1191 CDD eEF2_snRNP_like_C 1075 1153 - -
Mch2g0711 1191 FunFam Translation elongation factor 2 834 911 - -
Mch2g0711 1191 Pfam Protein tyrosine and serine/threonine kinase 170 357 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0711 1191 FunFam Integrin-linked protein kinase family 23 147 - -
Mch2g0711 1191 SUPERFAMILY Ribosomal protein S5 domain 2-like 910 1074 IPR020568 -
Mch2g0711 1191 SUPERFAMILY Ankyrin repeat 42 134 IPR036770 -
Mch2g0711 1191 SUPERFAMILY Translation proteins 690 824 IPR009000 -
Mch2g0711 1191 Pfam Elongation factor G C-terminus 1072 1159 IPR000640 -
Mch2g0711 1191 Pfam Elongation factor Tu domain 2 742 810 IPR004161 GO:0005525(InterPro)
Mch2g0711 1191 Gene3D Yeast translation eEF2 (G' domain) 570 674 - -
Mch2g0711 1191 Pfam Elongation Factor G, domain III 835 897 IPR041095 -
Mch2g0711 1191 CDD EF2_snRNP_III 835 907 - -
Mch2g0711 1191 SMART ANK_2a 104 133 IPR002110 GO:0005515(InterPro)
Mch2g0711 1191 SMART ANK_2a 39 67 IPR002110 GO:0005515(InterPro)
Mch2g0711 1191 SMART ANK_2a 71 100 IPR002110 GO:0005515(InterPro)
Mch2g0711 1191 ProSiteProfiles Protein kinase domain profile. 121 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0711 1191 FunFam Translation elongation factor 2 917 1070 - -
Mch2g0711 1191 NCBIfam small GTP-binding protein domain 368 524 IPR005225 GO:0005525(InterPro)
Mch2g0711 1191 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 406 421 IPR031157 -
Mch2g0711 1191 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 365 692 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch2g0711 1191 FunFam Translation elongation factor 2 691 832 - -
Mch2g0711 1191 FunFam Elongation factor 2 570 674 - -
Mch2g0711 1191 Gene3D Translation factors 691 832 - -
Mch2g0711 1191 Gene3D - 918 1070 IPR014721 -
Mch2g0711 1191 Gene3D Transferase(Phosphotransferase) domain 1 235 350 - -
Mch2g0711 1191 Pfam Elongation factor G, domain IV 958 1070 IPR005517 GO:0005525(InterPro)
Mch2g0711 1191 Gene3D - 1071 1191 - -
Mch2g0711 1191 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515(InterPro)
Mch2g0711 1191 CDD aeEF2_snRNP_like_IV 907 1079 - -
Mch2g0711 1191 SUPERFAMILY Protein kinase-like (PK-like) 169 350 IPR011009 -
Mch2g0711 1191 Pfam Elongation factor Tu GTP binding domain 366 569 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch2g0711 1191 Gene3D - 362 564 IPR027417 -
Mch2g0711 1191 FunFam serine/threonine-protein kinase STY46-like 149 232 - -
Mch2g0711 1191 FunFam Translation elongation factor 2 1071 1191 - -
Mch2g0711 1191 Gene3D Elongation Factor G (Translational Gtpase), domain 3 834 911 - -
Mch2g0711 1191 SMART EFG_C_a 1072 1161 IPR000640 -
Mch2g0711 1191 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 351 1190 - GO:0003746(PANTHER)|GO:0003924(PANTHER)|GO:0005829(PANTHER)|GO:0006414(PANTHER)|GO:0043022(PANTHER)|GO:1990904(PANTHER)
Mch2g0711 1191 SUPERFAMILY EF-G C-terminal domain-like 832 908 IPR035647 -
Mch2g0711 1191 SUPERFAMILY EF-G C-terminal domain-like 1075 1186 IPR035647 -
Mch2g0711 1191 CDD EF2_II 723 818 - -
Mch2g0711 1191 ProSiteProfiles Ankyrin repeat region circular profile. 71 102 - -
Mch2g0711 1191 Gene3D Phosphorylase Kinase; domain 1 174 234 - -
Mch2g0711 1191 SMART EFG_IV_2 954 1070 IPR005517 GO:0005525(InterPro)
Mch2g0711 1191 FunFam Translation elongation factor 2 351 585 - -
Mch2g0711 1191 Pfam Ankyrin repeats (3 copies) 43 132 IPR002110 GO:0005515(InterPro)
Mch2g0711 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 352 689 IPR027417 -
Mch2g0711 1191 Gene3D - 35 143 IPR036770 -
Mch2g0711 1191 CDD EF2 368 578 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0711 Mch-Chr2:4849705 Mch2g0732 Mch-Chr2:4997240 0 dispersed
Mch2g0710 Mch-Chr2:4845478 Mch2g0711 Mch-Chr2:4849705 0 tandem
Mch8g3004 Mch-Chr8:32644219 Mch2g0711 Mch-Chr2:4849705 7.72E-193 transposed
Mch6g1786 Mch-Chr6:20390384 Mch2g0711 Mch-Chr2:4849705 1.31E-29 transposed
Mch9g1121 Mch-Chr9:11159476 Mch2g0711 Mch-Chr2:4849705 4.31E-32 transposed
Mch1g1975 Mch-Chr1:19388249 Mch2g0711 Mch-Chr2:4849705 1.63E-128 wgd
Mch2g0711 Mch-Chr2:4849705 Mch3g1125 Mch-Chr3:14599627 1.75E-24 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77201 PF00009 GTP_EFTU 1.70E-65 CL0023 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0711 K03234 - csv:101208886 1664.43