Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0723 ATGGCGTCTGGAAATTCATTGAATGATGATTTATACAAGAAGACTTCATTTTGGGGATTGTCATTGTGGGTTTTGATCTGCATTTGCATCGGGGCATTTATAGTTTTGATTCTTGGTTTATTATCGATATGGGTCCTGTTTCGGAAAAAATCCAAAAGACCCATGGACAAGTTCCCTATTTCGCAAATACCTGATTTTCCAAAAGATATCAGGATAGACCAGGTTGGGACTCAAACTTCCAATGACCGCCCTGAAAATAGGCTTCTCTCAGTTGATATCAAGAGAAATGATGAAAACTCAGAGATGATGGTTGTGACCAAATCAAGCGAACCGGATAACAATAGCCAATGCAGTTCCACTCATCAACATGAAAAAGCTTGCAATTCACAATCAGGGGAAGAAGGAAGTTCTGGACATGCTCGGAAGCAGGCTTCGCGATCGTATGGAGGATATGGAGGAATTGTGCCACCGTCTCCTCTTGTTGGCTTGCCAGAAATTTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTGGAGCTTGCAACTAATCGCTTTTCTACAGAAAATATTCTTGGAGAGGGAGGATATGGAGTTGTGTACAAGGGTAGACTCATCAATGGCACTGAGGTTGCAGTGAAAAAACTTCTCAATAATCTGGGCCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCGATTGGCCATGTTCGGCATAAGAATCTTGTCCGGCTGCTGGGTTATTGCATAGAAGGAGTTCATAGGATGCTAGTGTATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTGCATGGAGCCATGTGCCAACATGGGACACTTACCTGGGAGGCTCGCATGAAGGTGCTTCTCGGCACTGCTAAGGCGCTTGCGTATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGATGAGTTCAATGCCAAGGTTTCTGATTTCGGATTGGCCAAGCTCTTGGGCTCTGGAGAGAGTCACATCACAACTAGGGTTATGGGAACATTTGGGTATGTGGCACCAGAATATGCTAATACGGGCCTGTTGAATGAAAAGAGCGACATTTATAGCTTTGGTGTTCTCCTGCTAGAAGCAATTACGGGGAGGGACCCAGTGGACTATGCCCGTCCCTCCGACGAAGTTAATCTTGTTGAGTGGCTAAAGATGATGGTTGCAACTAGGAGAGCAGAGGAAGTTGTGGACATGAACCTCGAGGTTAAACCAACTACTCGTGCTCTGAAACGTGCCCTTCTTGTTGCTCTTCGGTGTATCGATCCTGAGTCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGGATGCTTGAAGCCGATGAATTTCCACTGCACGAGGATAGAAGGAACCGAAAAAGCCGATCGATGAGCTTGGAGATAGAGTCGATGAAAGAAATATCAGGCTCGGAGCAGACGGGCGGGCAGTCAGAGAGCCATAAATCGGAGACAAGCCATGGATAG 1524 45.28 MASGNSLNDDLYKKTSFWGLSLWVLICICIGAFIVLILGLLSIWVLFRKKSKRPMDKFPISQIPDFPKDIRIDQVGTQTSNDRPENRLLSVDIKRNDENSEMMVVTKSSEPDNNSQCSSTHQHEKACNSQSGEEGSSGHARKQASRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSDEVNLVEWLKMMVATRRAEEVVDMNLEVKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSMSLEIESMKEISGSEQTGGQSESHKSETSHG 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4932723 4937641 - MC02g0616 Mch2g0723 681645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0723 507 Coils Coil 207 227 - -
Mch2g0723 507 FunFam Putative receptor-like protein kinase 169 262 - -
Mch2g0723 507 Gene3D Transferase(Phosphotransferase) domain 1 263 476 - -
Mch2g0723 507 FunFam Putative receptor-like serine/threonine-protein kinase 263 473 - -
Mch2g0723 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0723 507 SMART serkin_6 187 441 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0723 507 Pfam Protein kinase domain 188 456 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0723 507 PANTHER OS01G0323000 PROTEIN 6 488 IPR052232 -
Mch2g0723 507 Gene3D Phosphorylase Kinase; domain 1 169 262 - -
Mch2g0723 507 MobiDBLite consensus disorder prediction 481 500 - -
Mch2g0723 507 CDD STKc_IRAK 193 459 - -
Mch2g0723 507 MobiDBLite consensus disorder prediction 466 507 - -
Mch2g0723 507 MobiDBLite consensus disorder prediction 103 143 - -
Mch2g0723 507 ProSiteProfiles Protein kinase domain profile. 187 451 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0723 507 MobiDBLite consensus disorder prediction 466 480 - -
Mch2g0723 507 ProSitePatterns Protein kinases ATP-binding region signature. 193 216 IPR017441 GO:0005524(InterPro)
Mch2g0723 507 MobiDBLite consensus disorder prediction 103 149 - -
Mch2g0723 507 SUPERFAMILY Protein kinase-like (PK-like) 171 463 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0723 Mch-Chr2:4932723 Mch7g1272 Mch-Chr7:16185821 1.76E-176 dispersed
Mch2g0723 Mch-Chr2:4932723 Mch3g1127 Mch-Chr3:14612830 4.61E-61 wgd
Mch2g0723 Mch-Chr2:4932723 Mch4g2287 Mch-Chr4:24329816 6.02E-43 wgd
Mch2g0723 Mch-Chr2:4932723 Mch4g0052 Mch-Chr4:379044 5.67E-277 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77203 PF00069 Pkinase 2.10E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0723 - - - 0.0