Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0739 ATGAAGGAGAGTAGTGGAAGAAAACAAGGCACTCTCTCCCCATGCGCAGCCTGCAAACTCCTCCGGCGCCGCTGCGCTCACGACTGTGTTTTCGCCCCTTATTTTCCCGCCGACGAGCCCCACAAGTTCGCCAGCGTCCACAAGGTCTTCGGAGCCAGCAACGTCAACAAAATGTTACAGGAATTGCCAGAACACCAACGGAGCGATGCGGTGAGCTCGATGGTGTACGAAGCGAATGCAAGGATGCGAGATCCAGTGTATGGGTGTGTCGGAGCCATATCGTCGCTGCAGCAACAGATCGATCTCTTGCAAACGCAGCTGGCAATCGCGCAGGCGGAGGTGGTTCACATGCGGATGCGCCAATTCCCATCTACCTCCACTCCGAGCGCCGCCCACTCACCGGAAACTGCCGGGAAGCTGAACATTCCGGCGCAAAACAAGTCCTTTTTTACCATGGACATGGTTGGCCACGACAACATGGGGGAGTCCTTATGGTCGTCGTGTTAG 507 56.41 MKESSGRKQGTLSPCAACKLLRRRCAHDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARMRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFPSTSTPSAAHSPETAGKLNIPAQNKSFFTMDMVGHDNMGESLWSSC 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5062145 5064434 + MC02g0629 Mch2g0739 681661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0739 168 Coils Coil 93 113 - -
Mch2g0739 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 126 - -
Mch2g0739 168 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Mch2g0739 168 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0739 Mch-Chr2:5062145 Mch9g1433 Mch-Chr9:16724604 1.95E-56 dispersed
Mch10g0184 Mch-Chr10:1118245 Mch2g0739 Mch-Chr2:5062145 8.20E-40 transposed
Mch3g0858 Mch-Chr3:12548946 Mch2g0739 Mch-Chr2:5062145 1.10E-70 transposed
Mch9g1638 Mch-Chr9:18513217 Mch2g0739 Mch-Chr2:5062145 1.45E-41 transposed
Mch2g0739 Mch-Chr2:5062145 Mch4g0045 Mch-Chr4:317030 7.43E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42907 PF03195 LOB 1.20E-43 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0739 - - - 0.0