Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0739 | ATGAAGGAGAGTAGTGGAAGAAAACAAGGCACTCTCTCCCCATGCGCAGCCTGCAAACTCCTCCGGCGCCGCTGCGCTCACGACTGTGTTTTCGCCCCTTATTTTCCCGCCGACGAGCCCCACAAGTTCGCCAGCGTCCACAAGGTCTTCGGAGCCAGCAACGTCAACAAAATGTTACAGGAATTGCCAGAACACCAACGGAGCGATGCGGTGAGCTCGATGGTGTACGAAGCGAATGCAAGGATGCGAGATCCAGTGTATGGGTGTGTCGGAGCCATATCGTCGCTGCAGCAACAGATCGATCTCTTGCAAACGCAGCTGGCAATCGCGCAGGCGGAGGTGGTTCACATGCGGATGCGCCAATTCCCATCTACCTCCACTCCGAGCGCCGCCCACTCACCGGAAACTGCCGGGAAGCTGAACATTCCGGCGCAAAACAAGTCCTTTTTTACCATGGACATGGTTGGCCACGACAACATGGGGGAGTCCTTATGGTCGTCGTGTTAG | 507 | 56.41 | MKESSGRKQGTLSPCAACKLLRRRCAHDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARMRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFPSTSTPSAAHSPETAGKLNIPAQNKSFFTMDMVGHDNMGESLWSSC | 168 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5062145 | 5064434 | + | MC02g0629 | Mch2g0739 | 681661 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0739 | 168 | Coils | Coil | 93 | 113 | - | - | |
Mch2g0739 | 168 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 13 | 126 | - | - | |
Mch2g0739 | 168 | ProSiteProfiles | LOB domain profile. | 13 | 114 | IPR004883 | - | |
Mch2g0739 | 168 | Pfam | Lateral organ boundaries (LOB) domain | 14 | 111 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0739 | Mch-Chr2:5062145 | Mch9g1433 | Mch-Chr9:16724604 | 1.95E-56 | dispersed | |
Mch10g0184 | Mch-Chr10:1118245 | Mch2g0739 | Mch-Chr2:5062145 | 8.20E-40 | transposed | |
Mch3g0858 | Mch-Chr3:12548946 | Mch2g0739 | Mch-Chr2:5062145 | 1.10E-70 | transposed | |
Mch9g1638 | Mch-Chr9:18513217 | Mch2g0739 | Mch-Chr2:5062145 | 1.45E-41 | transposed | |
Mch2g0739 | Mch-Chr2:5062145 | Mch4g0045 | Mch-Chr4:317030 | 7.43E-59 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42907 | PF03195 | LOB | 1.20E-43 | No_clan | Mch | TF |
Pathway information
