Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0759 ATGAGGATGGCGGTCGCTGCAAACGCATTAGCAACAGATCGTTCAGTGGTGCGATCGAGCTGGCTTCGTCTTCTGTCTCCATCGTCTCATGTGTTTGCTGCGCAGAAATCTCGTTCTCACACTCTTCTCATTCGGCAGATGAGTTCCGAGGCGCAGAGTATCGCTGCTCGTCTACACAGTTCTGGATTGTTACGAAGCCAAGGCCTTATTGGCGGGAAGTGGATTGATGCCTATGACGGGAAGACCTTTAAGGTTCATAATCCAGCCAATGGTGAAGTTATAACAAATGTCCCGCTTATGGGCAAAAGGGAGACTGATGATGCTATTTCTTCAGCGTATAATGCTTTTAAGTGTTGGAGCAAACTCACTGCAGCTGACCGGAGTAATCACTTGCGTAAATGGTATGAGCTCCTAATTGCTCACAAAGAAGAGATCGGACAACTAATAACCTTAGAGCAAGGCAAACCCTTAAAGGAAGCCTTGGGTGAGACCAACTATGGGTCCAGCTTTATCGAGTTCTTTTCCGAGGAAGCAAAACGAGTATATGGTGATATAATCCCACCAACTCTAGCTGATCGTCGACTTTTTGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTATTACTCCTTGGAACTTTCCATTGGCTATGATTACACGAAAGGTTGGACCTGCTCTTGCATCTGGTTGTACGGTGGTCATAAAACCCGCTGAACTTACCCCCTTGACAGCTTTGGCAGCAGCTGAACTCTCACTTCAAGCTGGAATTCCCCCAGGTGTCGTGAATGTGGTTATGGGAGATGCTCCTGCCATTGGGGATGCTATGCTTGCAAGTTCTCAGGTAACAAAGATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAGTTGATGGCCGGAGCTGCTGGGACTGTTAAAAGGGTGTCTTTAGAACTTGGTGGTAATGCACCTTGCATAATCTTTGATGACGCAGATGTGGATATTGCAGTGAAAGGAGCCATTGCAGCAAAGTTTCGAAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTATTGTTCAAGAAGGTATATATGAGAAATTTTCAAATGCTTTCTCAAAAGCTGTGCAAAATCTGCAAGTTGGTGATGGGTTTGGTGACGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCTGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCATTGAAAAGGGAGCAAAAGTTCTTCTTGGTGGTAAAAGACATAGCCTTGGGATGACTTTTTTTGAGCCTACAGTTATTACTGACGTGAAGAGTGACATGCTTGTTTCCAGGGAGGAAGTATTTGGTCCTGTGGCGCCCTTACTTCCATTCAGAACAGAGGAGGAAGCAATTACTCTCGCTAATGGCACCAATGCAGGATTAGCTGCTTACATATTCACAAATAATATTCAACGTTCATGGAGAGTGACTGAAGCCCTCGAATATGGAATGGTTGGTGTTAATGAAGGCCTAATTTCTACGGAGGTGGCCCCATTTGGCGGTGTTAAACAGTCAGGCCTTGGTCGGGAAGGGTCGAAATACGGGATGGACGAGTATCTTGAGCTGAAATATGTATGCTTGGGGAATTTGGACAACTGA 1623 45.35 MRMAVAANALATDRSVVRSSWLRLLSPSSHVFAAQKSRSHTLLIRQMSSEAQSIAARLHSSGLLRSQGLIGGKWIDAYDGKTFKVHNPANGEVITNVPLMGKRETDDAISSAYNAFKCWSKLTAADRSNHLRKWYELLIAHKEEIGQLITLEQGKPLKEALGETNYGSSFIEFFSEEAKRVYGDIIPPTLADRRLFVLKQPVGVVGVITPWNFPLAMITRKVGPALASGCTVVIKPAELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAMLASSQVTKITFTGSTAVGKKLMAGAAGTVKRVSLELGGNAPCIIFDDADVDIAVKGAIAAKFRNSGQTCVCANRIIVQEGIYEKFSNAFSKAVQNLQVGDGFGDGVAQGPLINEAAVQKVEKFLQDAIEKGAKVLLGGKRHSLGMTFFEPTVITDVKSDMLVSREEVFGPVAPLLPFRTEEEAITLANGTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLELKYVCLGNLDN 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5207277 5225567 + MC02g0647 Mch2g0759 681681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0759 540 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 537 IPR050740 GO:0004777(PANTHER)|GO:0006807(PANTHER)|GO:0009450(PANTHER)
Mch2g0759 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 80 527 IPR016162 GO:0016491(InterPro)
Mch2g0759 540 Pfam Aldehyde dehydrogenase family 74 533 IPR015590 GO:0016491(InterPro)
Mch2g0759 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 309 316 IPR029510 GO:0016491(InterPro)
Mch2g0759 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 313 502 IPR016163 GO:0016620(InterPro)
Mch2g0759 540 SUPERFAMILY ALDH-like 63 537 IPR016161 GO:0016491(InterPro)
Mch2g0759 540 FunFam Succinate-semialdehyde dehydrogenase I 313 502 - -
Mch2g0759 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 337 348 IPR016160 GO:0016491(InterPro)
Mch2g0759 540 FunFam Succinate-semialdehyde dehydrogenase I 80 321 - -
Mch2g0759 540 FunFam Aldehyde dehydrogenase, putative 505 531 - -
Mch2g0759 540 NCBIfam succinate-semialdehyde dehydrogenase 85 531 IPR010102 GO:0009013(InterPro)|GO:0009450(InterPro)
Mch2g0759 540 CDD ALDH_F5_SSADH_GabD 85 535 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0759 Mch-Chr2:5207277 Mch6g0791 Mch-Chr6:5504644 3.87E-110 dispersed
Mch2g0759 Mch-Chr2:5207277 Mch8g0005 Mch-Chr8:44312 1.56E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0759 K17761 - csv:101217352 934.48