Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0784 ATGAAGTTCTGTTCAGCACCAGTGGTTCTTCTGCTTTTTGTCACTATTAATCTACTTCACCTTGCCATTGCTGACCTGAAATCCGATAAGCAAGCTCTTCTTGACTTTGCATCTTCTGTTCCACATCGTCGGAGTCTCAACTGGAACGATACTACACCCATATGTACATCTTGGGTTGGCATTACTTGCAGTGCAGATGGAACTCATGTGCTTACCCTTCGACTACCAGGGATTGGACTTGTAGGTTCGATCCCTCCTAAAACTCTAGGGAAACTTGATGGCCTCAAGGTTCTTAGCCTCCGCTCCAACCTCCTTAGCGGAAAAATCCCTTCCGATATTACCTCGCTTCCTTCTCTCCAATATCTCTTTCTTCAACGTAATAACTTATCCGGTGACGTTCCTACCTCCTTTTCTCCCACTCTTAATGTATTGGATCTATCATTCAATTCACTAGAAGGAAATATTCCAAAGACTATTCAAAATTTGACACAACTAACTGGACTGAATCTCCAGAACAACAATCTTTCTGGTCCTATACCAAATATCAACCTCCCTAAGCTCAAGCATTTCAATATAAGTTATAACGATCTTAATGGTTCTATCCCAACTTTTCTTAAAACGTTCCCAAATTCATCCTTCATTGGAAATTCTCTATTATGTGGACTGCCTCTTAAACCTTGTTCCTTAGTCCTATCTCCAGCTCCTGATGCTCCACCTGCCCCTGCTATTTCTCAAAAGCAGAGCTCCAAGAAACTGAAGATGGGAGTTATCATTGCCATCGCAGTTGGTGGATTTTTCCTTCTGTTTCTTGTAGTTCTTTTTGTGATTCTCTGCTGCTTAAAGGAGAAGGACAGTGGAGGCACCGGCACGAGAAAAGGGAAGGTTTCTGGTGGTGGGAGAAGCGAAAAACCTAAAGAGGAGTTTGGAAGTGGTGTGCAGGAGCCTGAGAAAAACAAGCTGGTGTTTTTTGAAGGATGTTCATATAATTTTGATCTTGAAGACCTATTAAGGGCCTCAGCTGAAGTGCTTGGAAAGGGTAGCTATGGAACGGCGTATAAAGCTGTCCTGGAGGAACCGACCACTGTTGTGGTGAAAAGATTGAAGGAAGTGGTGGTGGGGAAGAGGGAGTTTGAACAGCAGATGGAGATGGTGGGGGAGGTCGGGCAGCACCCGAACGTCATGCCACTCCGAGCTTATTATTACTCGAAGGATGAAAAGCTTCTTGTTTATGATTATGTCCCAGGAGGCAGCTTGTCATCGCTCCTGCACGGAAACAGAGGAGGGGAAAGAACTCCACTTGACTGGGACACAAGAGTGAAAATCTGTCTTGGAACTGCAAAGGGAATTGCTCATATTCATACAGTGGGTGGTCCAAAATTCACCCATGGAAATATCAAGGCCTCAAATGTCCTCCTAAATCAAGATGTCAATGCTTGTGTCTCTGACTTTGGCCTCACCCCTCTTATGAATGTCCCGTCTTCTCGAACTGCAGGTTATCGTGCGCCCGAGGTGATTGAAGCTCGTAAACACACGCACAAGTCAGATGTTTACAGCTTCGGTGTTCTTCTCCTCGAAATGTTAACTGGAAAAGCTCCCCTCCAATCCCCAGGTCGTGATGAAATGGTCGACCTACCTCGGTGGGTCCAATCGGTAGTGAGGGAGGAATGGACAGCTGAGGTGTTTGATGTCGAGCTAATGAGGTATCAGAATATTGAAGAAGAGATGGTGCAGATGTTGCAAATAGCAATGACTTGTGTCGCGAAGGTGCCCGACATGAGACCGAACATGGACGACGTAGTTAGACTGATCGAAGAAATCCGGCAATCTGACTCGGAGAACCGGCCGTCTTCTGAAGAGAACAAATCCAAGGACTCAAATGTGCAGACCCCATGA 1893 45.48 MKFCSAPVVLLLFVTINLLHLAIADLKSDKQALLDFASSVPHRRSLNWNDTTPICTSWVGITCSADGTHVLTLRLPGIGLVGSIPPKTLGKLDGLKVLSLRSNLLSGKIPSDITSLPSLQYLFLQRNNLSGDVPTSFSPTLNVLDLSFNSLEGNIPKTIQNLTQLTGLNLQNNNLSGPIPNINLPKLKHFNISYNDLNGSIPTFLKTFPNSSFIGNSLLCGLPLKPCSLVLSPAPDAPPAPAISQKQSSKKLKMGVIIAIAVGGFFLLFLVVLFVILCCLKEKDSGGTGTRKGKVSGGGRSEKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEEPTTVVVKRLKEVVVGKREFEQQMEMVGEVGQHPNVMPLRAYYYSKDEKLLVYDYVPGGSLSSLLHGNRGGERTPLDWDTRVKICLGTAKGIAHIHTVGGPKFTHGNIKASNVLLNQDVNACVSDFGLTPLMNVPSSRTAGYRAPEVIEARKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDEMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMTCVAKVPDMRPNMDDVVRLIEEIRQSDSENRPSSEENKSKDSNVQTP 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5394060 5398846 - MC02g0670 Mch2g0784 681706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0784 630 SUPERFAMILY L domain-like 39 227 - -
Mch2g0784 630 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Mch2g0784 630 Pfam Leucine Rich Repeat 186 206 IPR001611 GO:0005515(InterPro)
Mch2g0784 630 Pfam Leucine Rich Repeat 165 181 IPR001611 GO:0005515(InterPro)
Mch2g0784 630 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515(InterPro)
Mch2g0784 630 CDD STKc_IRAK 343 606 - -
Mch2g0784 630 MobiDBLite consensus disorder prediction 286 312 - -
Mch2g0784 630 FunFam pollen receptor-like kinase 1 305 412 - -
Mch2g0784 630 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Mch2g0784 630 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Mch2g0784 630 MobiDBLite consensus disorder prediction 296 312 - -
Mch2g0784 630 MobiDBLite consensus disorder prediction 605 630 - -
Mch2g0784 630 ProSiteProfiles Protein kinase domain profile. 337 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0784 630 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Mch2g0784 630 Pfam Protein tyrosine and serine/threonine kinase 341 601 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0784 630 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Mch2g0784 630 Pfam Leucine rich repeat 82 129 IPR001611 GO:0005515(InterPro)
Mch2g0784 630 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 413 618 - -
Mch2g0784 630 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Mch2g0784 630 ProSitePatterns Protein kinases ATP-binding region signature. 343 374 IPR017441 GO:0005524(InterPro)
Mch2g0784 630 PANTHER OS05G0588300 PROTEIN 10 620 IPR050994 -
Mch2g0784 630 MobiDBLite consensus disorder prediction 605 621 - -
Mch2g0784 630 Gene3D Phosphorylase Kinase; domain 1 305 412 - -
Mch2g0784 630 SUPERFAMILY Protein kinase-like (PK-like) 341 603 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0102 Mch-Chr10:592577 Mch2g0784 Mch-Chr2:5394060 5.99E-143 dispersed
Mch10g0284 Mch-Chr10:1827667 Mch2g0784 Mch-Chr2:5394060 2.70E-54 dispersed
Mch2g0784 Mch-Chr2:5394060 Mch6g1931 Mch-Chr6:21803876 4.78E-163 dispersed
Mch4g2236 Mch-Chr4:23929982 Mch2g0784 Mch-Chr2:5394060 1.66E-56 transposed
Mch5g1668 Mch-Chr5:17485443 Mch2g0784 Mch-Chr2:5394060 2.48E-105 transposed
Mch1g1228 Mch-Chr1:14622470 Mch2g0784 Mch-Chr2:5394060 3.67E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77205 PF00069 Pkinase 3.20E-37 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0784 - - - 0.0