Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0787 ATGGATCTCCTCCTCTTGGAGAAGGCGCTCCTCGGAATCTTCGCCGCGGTGGTTATCGCCATCGCCATTTCCAAACTCCGCGGCAAGCGATTCAGGCTCCCGCCGGGGCCGTTGCCGGTGCCGATATTCGGAAACTGGCTCCAGGTCGGCGATGACTTGAACCACCGCAATTTGAATGACCTGGCCAAGAGATTTGGCGATATCTTCTTGCTAAGGATGGGGCAGAGGAACCTCGTGGTGGTTTCCTCGCCGGAGCTGGCGAAGGAGGTGCTCCACACGCAGGGAGTGGAGTTCGGTTCACGAACCAGAAACGTCGTCTTTGATATCTTCACCGGGAAGGGCCAGGACATGGTGTTCACCGTCTACGGCGAGCATTGGCGGAAAATGAGGCGGATCATGACGGTGCCGTTTTTCACCAGCAAGGTGGTTCAGCAGTACAGGCACGGCTGGGAGGCCGAGGCCGCAAGCGTGGTGGAGGACGTGAAGAAGAATCCAGATTCGGCGACGACTGGAATCGTTCTTCGACGGCGATTGCAGCTTATGATGTACAACAACATGTACAGAATCATGTTCGATAGACGATTCGAGAGCGAGAATGATCCTCTGTTTCTCAAACTCAGGGCGCTGAATGGAGAGAGGAGCCGATTGGCGCAGAGCTTCGATTACAACTACGGCGATTTCATCCCGATCTTGAGGCCGTTCCTGAGAGGATACCTCAAAATCTGCAAGGAAGTGAAGGAAACAAGGCTCAAACTCTTTAAAGACTATTTCATCGAGGAGAGGAAGAAACTAGGGAATACCAAGATTACGACGAACGAGGGACTGAAATGTGCAATTGATCATATATTGGACGCGCAACAGAAAGGAGAAATCAACGAAGATAACGTGCTTTACATTGTGGAGAATATCAACGTTGCAGCAATTGAAACAACATTATGGTCGATTGAATGGGGAATCGCTGAGCTTGTGAACCACCCTGAAATCCAGAGCAAGCTAAGGAACGAGTTGGACACGGTTCTCGGACCGGGAGTCCCAATCACCGAGCCCGACATCTACAAGCTCCCGTATCTCCAGGCTGTGATCAAGGAGGCGCTCCGCCTCCGCATGGCGATCCCTCTTCTTGTCCCGCACATGAACCTCCACGACGCCAAGCTCGGCGGCTACGACATCCCCGCCGAGAGCAAGATCCTGGTTAACGCGTGGTGGCTGGCGAACAATCCGGCGACCTGGAAGAACCCGGAGGAGTTCCGGCCGGAGAGGTTCTTTGAGGAGGAGTCGAAGGTTGAGGCCAACGGGAATGACTTCCGATACCTGCCGTTCGGTGTGGGGAGGAGGAGCTGCCCCGGAATCATCTTGGCGCTGCCGATCCTCGCCATTACGATCGGGCGATTGGTTCAGAATTTTGAGCTGCTGCCTCCTCCTGGGCAGGCGAAGCTGGACACCTCGGAGAAAGGCGGGCAATTTAGCTTGCACATTTTGAAGCACTCCACCATTGTTGCCAAGCCGAGGGCATTCTAG 1518 54.48 MDLLLLEKALLGIFAAVVIAIAISKLRGKRFRLPPGPLPVPIFGNWLQVGDDLNHRNLNDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTSKVVQQYRHGWEAEAASVVEDVKKNPDSATTGIVLRRRLQLMMYNNMYRIMFDRRFESENDPLFLKLRALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKICKEVKETRLKLFKDYFIEERKKLGNTKITTNEGLKCAIDHILDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQSKLRNELDTVLGPGVPITEPDIYKLPYLQAVIKEALRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPATWKNPEEFRPERFFEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILAITIGRLVQNFELLPPPGQAKLDTSEKGGQFSLHILKHSTIVAKPRAF 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 5419291 5421777 + MC02g0672 Mch2g0787 681709
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0787 505 FunFam Trans-cinnamate 4-monooxygenase 23 497 - -
Mch2g0787 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 504 - GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER)
Mch2g0787 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 CDD CYP73 63 496 - -
Mch2g0787 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch2g0787 505 Gene3D Cytochrome P450 23 496 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch2g0787 505 Pfam Cytochrome P450 34 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0787 Mch-Chr2:5419291 Mch8g2594 Mch-Chr8:29084628 6.05E-232 dispersed
Mch1g1246 Mch-Chr1:14737877 Mch2g0787 Mch-Chr2:5419291 1.25E-60 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0787 K00487 - csv:101221846 938.717