Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch2g0789 | ATGCAAGATCCAGCTTCTTCAAACCCTATCCACACTCCCAATTCCAATCCGATTCCTCCGCTCAATGTTGCATTGTCGCCGGCAGTAGCTCCTCCGCCGCCGAAGACTCATAAACCCCCGCCGGTGGCGAATGCGACCGCTTCCTCCTCAATGTTCGGGAATTCGAATTCCCCCAACGGCTCATTCGTGCTGAGAGCCGGTTCTCATCATCGGCGGGCTCATTCGGAAGTCAGCTTCCGCTTACCGGAGGATATGATGGATCTCTCCGGCTCCGATCCGTTCAATGGCGGTTCGTCCACCGCAAGTCTGGAGGAGATCGGATCGGAGGATGATCTGTTTTCTACCTACATTGATGTGAAGAAGCTTGGGGGTAATGGAGGGGGGAATTACGCGGATCATAATGCCAATGGCGGAAGTGAAGGCGCCGGCGGTAGTGAGGGAGAGAAGACTTCAAAGCCAAGGCATCGCCATAGCGTCTCCGTGGACGGAACGACGTCGTCGTCCAGCATGTTTGGGGAGATAATGGAAGCCAAGAAAGCCATGCCTCCGGATAAGTTGGCTGAGCTCTGGACCAGTGACCCCAAGCGCGCCAAAAGGATATTGGCAAATCGACAGTCTGCAGCTCGCTCAAAAGAGAGGAAAGCGCGATATATACAAGAGCTCGAGCGCAAAGTGCAGACCCTTCAAACAGAAGCAACTACTCTATCAGCCCAATTGACTTTGTTCCAGCGAGACACAACGGGTCTCAGTACCGAGAATACAGAGCTTAAACTGCGGCTGCAGGCTATGGAGCAACAGGCTCAATTGCGTGATGCTCTGAATGAAGCACTAAAGAAGGAAGTCGAGAGGCTTCGAATCGCTACCGGGGAAATAATGAGCCCTTCTGAGTCGTTTAACTTGGGAATGCATCACATGGCATACGCCCCATCGTCTTTCATTCAACTTCCACCGCAACCGGGATCTGCAGGCCCTCAGAACATGCAAATGCCACCATATAGCCATTCACTATCTAATATGTCTAGCCACCCTCTGCATCAATCAGATTCTCATTCTCTCTCAGAAGTTCTGCAGAGCGACCCCATAGGCCGATTGCAGGGTCTCGACATCAGTAGTAAAGGACCATCACTCGTGAAATCCGAGGGCCCCTCACTTTCTGCTAGTGAGAGCAGTACAACCTTTTGA | 1182 | 52.37 | MQDPASSNPIHTPNSNPIPPLNVALSPAVAPPPPKTHKPPPVANATASSSMFGNSNSPNGSFVLRAGSHHRRAHSEVSFRLPEDMMDLSGSDPFNGGSSTASLEEIGSEDDLFSTYIDVKKLGGNGGGNYADHNANGGSEGAGGSEGEKTSKPRHRHSVSVDGTTSSSSMFGEIMEAKKAMPPDKLAELWTSDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLRIATGEIMSPSESFNLGMHHMAYAPSSFIQLPPQPGSAGPQNMQMPPYSHSLSNMSSHPLHQSDSHSLSEVLQSDPIGRLQGLDISSKGPSLVKSEGPSLSASESSTTF | 393 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5435670 | 5438726 | + | MC02g0674 | Mch2g0789 | 681711 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch2g0789 | 393 | SMART | brlzneu | 191 | 255 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch2g0789 | 393 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Mch2g0789 | 393 | MobiDBLite | consensus disorder prediction | 314 | 358 | - | - | |
Mch2g0789 | 393 | Pfam | bZIP transcription factor | 195 | 243 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch2g0789 | 393 | SUPERFAMILY | Leucine zipper domain | 195 | 246 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch2g0789 | 393 | FunFam | probable transcription factor PosF21 | 194 | 247 | - | - | |
Mch2g0789 | 393 | MobiDBLite | consensus disorder prediction | 42 | 63 | - | - | |
Mch2g0789 | 393 | MobiDBLite | consensus disorder prediction | 1 | 106 | - | - | |
Mch2g0789 | 393 | MobiDBLite | consensus disorder prediction | 376 | 393 | - | - | |
Mch2g0789 | 393 | MobiDBLite | consensus disorder prediction | 312 | 393 | - | - | |
Mch2g0789 | 393 | Coils | Coil | 259 | 283 | - | - | |
Mch2g0789 | 393 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 193 | 256 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch2g0789 | 393 | CDD | bZIP_plant_RF2 | 196 | 245 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch2g0789 | 393 | MobiDBLite | consensus disorder prediction | 123 | 169 | - | - | |
Mch2g0789 | 393 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 42 | 346 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Mch2g0789 | 393 | Gene3D | - | 194 | 247 | - | - | |
Mch2g0789 | 393 | MobiDBLite | consensus disorder prediction | 24 | 40 | - | - | |
Mch2g0789 | 393 | Coils | Coil | 211 | 238 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0789 | Mch-Chr2:5435670 | Mch9g1386 | Mch-Chr9:16236536 | 9.86E-86 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42913 | PF00170 | bZIP_1 | 1.40E-08 | CL0018 | Mch | TF |
Pathway information
