Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0793 ATGTTCAAGAATACTCGAGCTGGGAAACCCGGCAGCAACTCGGAATTTGGATACGCTGAGACCGATCCGACATGTCGTTACGGCCGCTTTGAAGAAGTTCTGGGGAAAGGGGCCATGAAGACAGTGTACAAAGCCATTGATGAGTTTCTTGGAATAGAGGTGGCGTGGAGTCAGGTGAAACTCAATGAAGTTCTCCGATCGCCCGAGGATTTGCAGCGGCTGTATTCGGAGGTTCACCTACTTAGCACACTTAAACACGAATCGATCATGCGATTCTACACCTCTTGGATTGATGTTGAGCGCAAAACCTTCAACTTCATCACCGAACTGTTTACTTCTGGAACACTCAGAGAATACGTGAAGAAATATCAGCAAGTCGATATCAGAGCCATTAAGAGCTGGGCATGCCAGATTCTGCAGGGGCTTGTTTATTTGCACGAGCACGACCCTCCGATAATTCACCGAGACTTGAAGTGTGATAATATATTTGTAAATGGCCATCTTGGGCAAGTCAAGATTGGTGACTTGGGGCTTGCAGCAATACTCCATGGTTCCAGATCTGCTCACAGTGTTATAGGCACACCGGAGTTCATGGCCCCAGAGCTATATGAGGAGCATTACAATGAGCTAGTTGATGTCTACTCATTTGGCATGTGTGTTCTGGAGATGCTTACTTCCGAGTACCCATATAGCGAGTGTACTAATCCTGCACAGATTTACAAGAAAGTCACGTCGGGGAAGCTGCCAGCAGCATTGTACAAGATTCAAGACGTGGAAGCGCAGAGATTTATAAAGAAATGCTTGGTACCGGTTTCGATGAGAGCGTCTGCAAAGGAATTGTTATCTGATCCCTTTCTCATGGCTGATGGAGATAGACCTTCGTTGAGAGAGAAGAATCAAAACCAGAAGCCCTTTCTAAATGCCAAAGAGATGGAGAAGTTGCATTTAGGTGAAGGTTTAAGCAGGACAAACATGACAATCACGGGGAAGCTGAACCCTGAAGATGATACCCTCTTTCTCAGAGTTCAAATTGCAGATAAAGATGGCTCTCTTAGGAACATATACTTCCCCTTCGACATAGTGAACGACACCGCAATAGATGTGGCAATGGAAATGGTGAAAGAGATGGAGATCTCCGATTGGGAGCCATTCGAAATAGCAGACATGATCGAAGGAGAAATATCGGCTCTGGTTCCAAACTGGAATAGAAGTGAGTTGTCCAACCATAGCCTCAGCTTCAGCTATGCAGAAGAAGATGATGATGCACCTCATCATAATTTCCGCTCCGTCTCCTCGTCATCCCAAGCGACAACTCTGGGCTTCGCCACCTCCCCAAGAACAAATCAAAACATGTCAGATGGTTTTAGTTGGTTCCCAGATGATGCACTTGACGACAGCAGCTCACAGTGCTCATCAGCGTCGGAAAAATACTCCAACTTGAACTACGTCAGCAGCGACGAGTACGAGACAAGTATGAGTTCGGTCCGAATAGATCAATATAGCAACATCAACAAGATTCACAACTCCTCCAGATTTTGTCCCAATGAGAACCGCAAAAACAAGGATTTCTTGTCTGGAATTCTGTACAAGCAGAGCCAATGCACGGTAGGGTCATCTCAGGTAGCTGCAGCCTCTGGCCGTAAAGACAAGAGGGGAATGGATTCCCGTAGATTAACAAGAAACAGATCGCTAGTCGATGTACATAGCCAATTGCTGCATCGATCATTGGTCGAGGAAGTGAATAGGAGACGGTTGTTCAAGACGGTTGGAGCGGTCGAGAGCATTGGGTTTCAAGCACCATGTGAGGTTTCTTCCAGCAAAAGGGTGTCAAGCAGGCATACGGTCGGGAATCGAAGTAGCGATGTAGTGAGAACGAGGAGAAACGACGATATTAGGCAAGATGTTGGAAGGAGAACATGA 1920 46.41 MFKNTRAGKPGSNSEFGYAETDPTCRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMRFYTSWIDVERKTFNFITELFTSGTLREYVKKYQQVDIRAIKSWACQILQGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSRSAHSVIGTPEFMAPELYEEHYNELVDVYSFGMCVLEMLTSEYPYSECTNPAQIYKKVTSGKLPAALYKIQDVEAQRFIKKCLVPVSMRASAKELLSDPFLMADGDRPSLREKNQNQKPFLNAKEMEKLHLGEGLSRTNMTITGKLNPEDDTLFLRVQIADKDGSLRNIYFPFDIVNDTAIDVAMEMVKEMEISDWEPFEIADMIEGEISALVPNWNRSELSNHSLSFSYAEEDDDAPHHNFRSVSSSSQATTLGFATSPRTNQNMSDGFSWFPDDALDDSSSQCSSASEKYSNLNYVSSDEYETSMSSVRIDQYSNINKIHNSSRFCPNENRKNKDFLSGILYKQSQCTVGSSQVAAASGRKDKRGMDSRRLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSKRVSSRHTVGNRSSDVVRTRRNDDIRQDVGRRT 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5468544 5472767 + MC02g0677 Mch2g0793 681715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0793 639 CDD STKc_WNK 26 286 - -
Mch2g0793 639 FunFam Probable serine/threonine-protein kinase WNK1 12 109 - -
Mch2g0793 639 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0793 639 Gene3D Transferase(Phosphotransferase) domain 1 111 291 - -
Mch2g0793 639 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 595 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Mch2g0793 639 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Mch2g0793 639 SMART serkin_6 28 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0793 639 FunFam probable serine/threonine-protein kinase WNK9 111 291 - -
Mch2g0793 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0793 639 MobiDBLite consensus disorder prediction 606 639 - -
Mch2g0793 639 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Mch2g0793 639 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0793 639 MobiDBLite consensus disorder prediction 619 639 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0793 Mch-Chr2:5468544 Mch7g1064 Mch-Chr7:14680084 3.60E-155 dispersed
Mch2g0793 Mch-Chr2:5468544 Mch8g2922 Mch-Chr8:31967533 4.64E-155 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77206 PF00069 Pkinase 1.50E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0793 K08867 - csv:101203757 1127.85