Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0796 CTTTTCGGGAAGTACGAGCTCGGCAAGCTCCTCGGCTGCGGTGCCTTCGCCAAGGTCTACCATGCCCGCGACCTCCACTCCGGCCACAGCGTCGCCGTCAAAGTCATCAACAAGAAGAAGCTCAATGGCACTACTCTAATGTCCAACATCAAGCGCGAAATCTCCATCATGCGCCGTCTCCGCCACCCTCACATCGTCAAGCTCCATGAGGTCCTCGCCACCAAATCCAAGATCTACTTCGTTATGGAGTTCGTCAAGGGCGGGGAACTCTTCGCCAAGATCGCCAAGGGCAGATTCAGCGAGGATCTCAGTCGGAAATTCTTCCAGCAGTTGATCTCCGCCATCGGGTTCTGTCACGCGCGTGGTGTGTATCATCGTGATCTGAAGCCGGAGAATCTCCTTGTCGATGAGAATGGGAATTTGAAGGTCTCGGATTTTGGACTTAGTGCTGTGACGGACCAGATCCGGTCCGATGGACTGTTGCATACTCTGTGTGGAACTCCGGCGTATGTCGCGCCGGAGATCTTGGCGAAGAAGGGGTACGATGGTGCGAAGGTCGATGTGTGGTCCTGCGGTGTGATTCTCTTCGTCTTGAACGCCGGTTACCTTCCGTTCAACGATCCAAATCTAATGGCGATGTATAAGAAGATCTACAAGGGGGAATATCGGTGCCCTAAATGGATGTCGCCGGAGCTCAAGAGGTTTCTATCCAGACTCCTCGATACGAATCCCCAAACGAGGATCACCGTCGATGAGATTCTGAGGGATCCGTGGTTCAGAAAGGGGGGATTTAAGGAGGTCAATTTCTACGACGATTACGAGGCGAAATTGGAAGAGAAGAACGAATCTCCAACGACGAATTTGAACGCATTCGACATCATATCGTTCTCGTCGGGATTGGATTTGTCCAATTTGTTCGATAATTCCAACAACGCCGTGGAAGACAGGGAACGGTTCATCGTGTCAGCGGAATCGCCGGAGAAAATCGTGGAAAAAGTGCAGGAGTTCGCTAGGGCTGAGAAATTGAAGGTGAAGAAACAGAGTGAATTGGGGGTTGATTTGGAGGGACGGAATCGTAATTTCGTGGTCGGAATTGAAATTTTGCGGTTAACCGACCGATTGGTGGTGGTGGAGGCGAGAAGAAGAAGCGGCGACGTAGAATCGTACAAGGCACTGTTGACGAAGAAGCTTAAAGCTCATCTC 1203 51.54 LFGKYELGKLLGCGAFAKVYHARDLHSGHSVAVKVINKKKLNGTTLMSNIKREISIMRRLRHPHIVKLHEVLATKSKIYFVMEFVKGGELFAKIAKGRFSEDLSRKFFQQLISAIGFCHARGVYHRDLKPENLLVDENGNLKVSDFGLSAVTDQIRSDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVILFVLNAGYLPFNDPNLMAMYKKIYKGEYRCPKWMSPELKRFLSRLLDTNPQTRITVDEILRDPWFRKGGFKEVNFYDDYEAKLEEKNESPTTNLNAFDIISFSSGLDLSNLFDNSNNAVEDRERFIVSAESPEKIVEKVQEFARAEKLKVKKQSELGVDLEGRNRNFVVGIEILRLTDRLVVVEARRRSGDVESYKALLTKKLKAHL 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5490155 5491357 + MC02g0679 Mch2g0796 681718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0796 401 ProSiteProfiles NAF domain profile. 283 307 IPR018451 GO:0007165(InterPro)
Mch2g0796 401 FunFam Non-specific serine/threonine protein kinase 1 84 - -
Mch2g0796 401 Gene3D Transferase(Phosphotransferase) domain 1 87 263 - -
Mch2g0796 401 CDD CIPK_C 289 401 - -
Mch2g0796 401 SUPERFAMILY Protein kinase-like (PK-like) 2 267 IPR011009 -
Mch2g0796 401 Gene3D Phosphorylase Kinase; domain 1 2 86 - -
Mch2g0796 401 Pfam Protein kinase domain 5 259 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0796 401 FunFam Non-specific serine/threonine protein kinase 1 287 - -
Mch2g0796 401 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 395 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Mch2g0796 401 Pfam NAF domain 286 346 IPR004041 GO:0007165(InterPro)
Mch2g0796 401 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524(InterPro)
Mch2g0796 401 ProSiteProfiles Protein kinase domain profile. 5 259 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0796 401 Gene3D Kinase associated domain 1, KA1 284 401 - -
Mch2g0796 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0796 401 SMART serkin_6 5 259 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0796 Mch-Chr2:5490155 Mch8g2989 Mch-Chr8:32521646 9.57E-150 dispersed
Mch2g0796 Mch-Chr2:5490155 Mch2g0797 Mch-Chr2:5493232 1.53E-135 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77207 PF00069 Pkinase 1.50E-72 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0796 - - - 0.0