Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0797 ATGGAAAATAAATCGAGTGTGATGATACAAAGGTATGAATTAGGGAGATTACTCGGCCAAGGAACCTTTGCAAAGGTATATTATGCGAGGAATACAAGGAGTAATCAAAGTGTGGCAATTAAGGTGATTGATAAAGAAAAGATTACAAAGGCTTCACTAATCGATCAGATTAAGCGTGAAATTTCGATTATGAGACTTGTTAGACATCCTAATATTGTACATCTTTACGAGGTTATGGCCACAAAGACTAAGATCTACTTTGTCTTGGAGTATGCTAAAGGCGGTGAGCTCTTTGACAAGGTTGCTAAAGGGAGGCTGAAGGAGGATGTTGCTTGGAAATATTTTTACCAGTTAATCAATGCTGTTGATTTCTGTCACAGTAGGGGAGTATATCACCGTGATATAAAGCCGGAGAACCTACTCCTTGATGAAAATGAGAATCTTAAGGTGTCTGATTTTGGTTTAAGCGCGCTAGCCGAGTCCAGGCGTCAAGATGGGTTGCTCCACACTACTTGTGGTACTCCAGCTTATGTTGCCCCTGAAGTCATCAGTAGGAAGGGCTATGATGGTGCAAAATCTGATATCTGGTCTTGTGGAGTAGTTTTGTTTGTCTTGTTGGCAGGTTATCTCCCATTCCACGATTCAAATTTGATGGAAATGTATCGGAAGATTGGAAGAGCAGAATATAAATGCCCGAGTTGGTTCCCTCGTGAAGTGCGGAGGCTGCTAAGTCGGATGCTCGATCCAAACCCCAATACGAGGACGCCCATAGCAATGATTAGACAAAGTTCTTGGTTCAAAAAAGGATTGAGGTTAAAGAATGTTGGAAGTGGAACAGAAAGCGATGCTGTAACTACAGAAGATGAAGCTACTTCTGGACCATCTGAGAGTAGTGTCCCTGACCCTGCAGATGGAAAGCAAGAGCCAGATAGACCCCCGAGTTTGAATGCTTTCGATATCATCTCCCTTTCTGCAGGATTCGATCTATCCAGTTTATTTGAAGACAACTCAAAGAAGAAAGAAACGTTGTTTACTTGTAGAAAACATGCCTCTGTCATTCTCTCAAAGCTGGAAGAAGTTGCCAAACTTCTAAGGTTCCGTGTGCAGAAGAAGGAAGCTGGCCTACTGAAGTTTGAGGCACTAACAGAGGGTAAAAAGGGGGCATTGTCCATTGATACAGAGATCTTTGAGGTTACTCCATCGTTTTATTTGGTGGAGATGAAAAAATCTAATGGAGACACATTGGAATATCAGAAGATATTGAAAGAGGATATAAGGCCAGCCCTACAGGATATTGTATGGGTTTGGCGGGAAGATCATGAGCAGCAGCAGCAACAACAACAACAGCCTCAGCTTCTCCAACACCAGGATCCGAATCTGGAACGGGAGCAAGATGGCACATCACAAAGCAGTAGCAGCACGAAGAACAACTCACAAAACCTGGGTTCGGAAGGATCTTAA 1461 42.78 MENKSSVMIQRYELGRLLGQGTFAKVYYARNTRSNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNIVHLYEVMATKTKIYFVLEYAKGGELFDKVAKGRLKEDVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESRRQDGLLHTTCGTPAYVAPEVISRKGYDGAKSDIWSCGVVLFVLLAGYLPFHDSNLMEMYRKIGRAEYKCPSWFPREVRRLLSRMLDPNPNTRTPIAMIRQSSWFKKGLRLKNVGSGTESDAVTTEDEATSGPSESSVPDPADGKQEPDRPPSLNAFDIISLSAGFDLSSLFEDNSKKKETLFTCRKHASVILSKLEEVAKLLRFRVQKKEAGLLKFEALTEGKKGALSIDTEIFEVTPSFYLVEMKKSNGDTLEYQKILKEDIRPALQDIVWVWREDHEQQQQQQQQPQLLQHQDPNLEREQDGTSQSSSSTKNNSQNLGSEGS 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5493232 5496796 - MC02g0680 Mch2g0797 681719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0797 486 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Mch2g0797 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch2g0797 486 MobiDBLite consensus disorder prediction 275 312 - -
Mch2g0797 486 SMART serkin_6 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0797 486 MobiDBLite consensus disorder prediction 278 298 - -
Mch2g0797 486 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Mch2g0797 486 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524(InterPro)
Mch2g0797 486 Gene3D Transferase(Phosphotransferase) domain 1 2 301 - -
Mch2g0797 486 Gene3D Kinase associated domain 1, KA1 310 435 - -
Mch2g0797 486 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0797 486 Pfam NAF domain 312 370 IPR004041 GO:0007165(InterPro)
Mch2g0797 486 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165(InterPro)
Mch2g0797 486 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 423 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Mch2g0797 486 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Mch2g0797 486 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch2g0797 486 FunFam Non-specific serine/threonine protein kinase 2 292 - -
Mch2g0797 486 CDD STKc_SnRK3 11 265 - -
Mch2g0797 486 CDD CIPK_C 316 430 - -
Mch2g0797 486 MobiDBLite consensus disorder prediction 444 486 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0507 Mch-Chr11:3220558 Mch2g0797 Mch-Chr2:5493232 8.30E-169 dispersed
Mch2g0797 Mch-Chr2:5493232 Mch3g1072 Mch-Chr3:14233192 2.15E-204 dispersed
Mch2g0796 Mch-Chr2:5490155 Mch2g0797 Mch-Chr2:5493232 1.53E-135 tandem
Mch1g1268 Mch-Chr1:14891070 Mch2g0797 Mch-Chr2:5493232 9.05E-17 wgd
Mch2g0797 Mch-Chr2:5493232 Mch4g2347 Mch-Chr4:24752181 1.64E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77208 PF00069 Pkinase 1.30E-74 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0797 - - - 0.0