Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0799 ATGTCCACCACACTTCTCTTCCCAATTAGCCTAAAAATGGCAATCACTGTTTCTCACACTCCCAAAAAAATGGTGGTTTTGGCTTTAGCTCTGCAGCTCTTCCTTTTGATGGGCAGCTCTTCTGCCCAGCTCTCCACCACCTTCTACTCCAAGACCTGCCCCAACCTCCTTTCCACCGTCAGGGCTGGAGTCCGCTCTGCCATCGCTAAGGAAGCCCGTATCGGCGCTTCCCTCCTCCGCCTCCACTTCCACGACTGCTTTGTTAACGGTTGTGACGGGTCAATTCTATTAGACGACACTCCAACTTTCATGGGAGAGCAAACAGCACCTCCAAATAATAGGTCTGTTAGAGGCTTTGATGTCATAAAAGATATCAAGAGTAGCGTAGAGAAAGTTTGTCCTAGCGTTGTCTCGTGTGCTGATATTTTGACTCTTACTTCTCGTGACTCTGTCGTCATTTTGGGAGGGCCAAGCTGGGAGGTGAAACTAGGAAGAAGAGATTCCAAAACAGCCAGTTTCTCCGCTGCCAGCAGCGGCGTCATCCCTCCACCGACCTCCACCCTTAGCAACCTCATCAACCGGTTTAACGCCGTAGGCCTATCAACGAAAGACATGGTTGCCTTGTCCGGGGCCCATACGATTGGACAGGCGAGGTGCGTAAGCTTTAGAAACCGCATATACAACGAGTCCAACATAGATGCTTCGTTCGCCAAGCTAAGACAGAGAAATTGCCCAAGAAGTGGAGGAGATGACAATCTTGCCCCCCTCGACGTCGTGACACTAAAGCTTTTCGACAACTATTACTACAAGAACCTTTTGAACCAGAAGGGCTTACTCCACTCCGACCAGGTCCTCCACAACGGCGGATCTACTGACTCATTGGTCGAGCTATACAGCAAAAATGATAAGACCTTCGATGCCGATTTCGTGGCGGCTATGATCAGAATGGGAGACATCAAGCCGCTCACCGGATCACAGGGCGAGATCAGAAAGGTCTGCAGCAGACCCAACTGA 1014 50.39 MSTTLLFPISLKMAITVSHTPKKMVVLALALQLFLLMGSSSAQLSTTFYSKTCPNLLSTVRAGVRSAIAKEARIGASLLRLHFHDCFVNGCDGSILLDDTPTFMGEQTAPPNNRSVRGFDVIKDIKSSVEKVCPSVVSCADILTLTSRDSVVILGGPSWEVKLGRRDSKTASFSAASSGVIPPPTSTLSNLINRFNAVGLSTKDMVALSGAHTIGQARCVSFRNRIYNESNIDASFAKLRQRNCPRSGGDDNLAPLDVVTLKLFDNYYYKNLLNQKGLLHSDQVLHNGGSTDSLVELYSKNDKTFDADFVAAMIRMGDIKPLTGSQGEIRKVCSRPN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5500397 5502148 - MC02g0682 Mch2g0799 681721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0799 337 Gene3D Peroxidase, domain 2 182 316 - -
Mch2g0799 337 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601(InterPro)
Mch2g0799 337 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 Gene3D - 47 334 - -
Mch2g0799 337 FunFam Peroxidase 47 189 - -
Mch2g0799 337 SUPERFAMILY Heme-dependent peroxidases 43 337 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 ProSiteProfiles Plant heme peroxidase family profile. 43 337 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Mch2g0799 337 PANTHER PEROXIDASE 72-RELATED 33 335 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 Pfam Peroxidase 60 301 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0799 337 CDD secretory_peroxidase 43 335 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g0799 337 FunFam Peroxidase 182 316 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0799 Mch-Chr2:5500397 Mch3g0029 Mch-Chr3:308572 7.90E-137 dispersed
Mch2g0799 Mch-Chr2:5500397 Mch2g0800 Mch-Chr2:5507204 4.22E-175 tandem
Mch4g2473 Mch-Chr4:25560499 Mch2g0799 Mch-Chr2:5500397 2.26E-133 transposed
Mch1g1272 Mch-Chr1:14928910 Mch2g0799 Mch-Chr2:5500397 7.26E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0799 K00430 - csv:101207371 542.347