Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0800 ATGGCCATTGCTTTGGTTTTAGCCTTGTTGGCTGTGTTCTTGGGGAGCTCCTCAGCTCAGCTCTCCCCCAACTTCTACTACAAGAGCTGCCCCAAGCTCCTCAGCACCGTCAGAGCCGGTATCCGCTCTGCCGTTGCTAAGGAAGCTCGCATGGGCGCTTCTCTTCTCCGCCTCCACTTCCACGACTGCTTTGTTAATGGTTGCGATGGATCGATTCTTCTGGAAGATACTCCTACGTTTAGAGGGGAGCAAACGGCGGCTCCCAATAATAGATCCGTTAGAGGGTTTAATGTGATTGAGAGTATAAAGAAAAATGTTGAAAAAATTTGTCCTGGTGTTGTATCATGCGCTGATATTTTGACTCTCTCTGCTCGAGATTCTGTTGTAACTCTCGGAGGGCCAAGTTGGGAGGTGAAATTGGGAAGAAGAGATTCCAAAACAGCCAGCTTCGCCGCTGCCAACAGTGGCGCCATTCCTCCGCCGACCTCCACTCTCGACACCCTCATCAACCGATTCGGTTCCAAAGGTCTCTCCACACGAGACTTGGTTGCCTTATCAGGTGCCCACACGATCGGTCAGGCGAGATGTTTGTTTTTCAAGAATCGAATATACAACGAGACCAACATCGACGAGTCGTTCGCAGAGGAGAGGCAAAGGAACTGCCCTACAAATGGAGGGGACGACAATCATGCCCCTCTGGACTTCAGAACCCACAAGCTTTTCGACAACTACTTCTACAAGAACCTTCTCGAGAAAAAGGCTCTGCTCCGCTCCGATCAAGTGCTTCACGATGGTGGATCCACCGACTCCTTGGTCGAACTCTACGGCGACGACAGCGACGCCTTCGAGTCCGATTTTGTGGCGGCCATGATCAAGATGGGCGACATTGAGCCACTAACTGGATCGCAGGGCCAGATTAGGAAGGTCTGCAGCAGACACAACTGA 945 51.53 MAIALVLALLAVFLGSSSAQLSPNFYYKSCPKLLSTVRAGIRSAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFRGEQTAAPNNRSVRGFNVIESIKKNVEKICPGVVSCADILTLSARDSVVTLGGPSWEVKLGRRDSKTASFAAANSGAIPPPTSTLDTLINRFGSKGLSTRDLVALSGAHTIGQARCLFFKNRIYNETNIDESFAEERQRNCPTNGGDDNHAPLDFRTHKLFDNYFYKNLLEKKALLRSDQVLHDGGSTDSLVELYGDDSDAFESDFVAAMIKMGDIEPLTGSQGQIRKVCSRHN 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5507204 5508564 - MC02g_new0118 Mch2g0800 681722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0800 314 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 CDD secretory_peroxidase 20 312 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g0800 314 Gene3D - 24 311 - -
Mch2g0800 314 Pfam Peroxidase 37 277 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Mch2g0800 314 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Mch2g0800 314 FunFam Peroxidase 24 166 - -
Mch2g0800 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 FunFam Peroxidase 159 293 - -
Mch2g0800 314 PANTHER PEROXIDASE 72-RELATED 9 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 SUPERFAMILY Heme-dependent peroxidases 20 314 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0800 314 Gene3D Peroxidase, domain 2 159 293 - -
Mch2g0800 314 ProSiteProfiles Plant heme peroxidase family profile. 20 314 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0800 Mch-Chr2:5507204 Mch3g0029 Mch-Chr3:308572 1.55E-135 dispersed
Mch2g0800 Mch-Chr2:5507204 Mch2g0802 Mch-Chr2:5520136 2.58E-105 proximal
Mch2g0799 Mch-Chr2:5500397 Mch2g0800 Mch-Chr2:5507204 4.22E-175 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0800 K00430 - csv:101204245 552.747