Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch2g0802 ATAGTATCTCCAATGGCAGCCCTTCTTCGCTCTATTTTGCTCTGTGTTTTTGTTCTATCAGCTGCTCTGAGCAATAGCCAAGCACAGCTGACTCCAAACTTTTACAACAAAGTCTGCCCCAAGGCCTTGTCCACCATAAAATCCGTTGTCTGGCAGGCCATCAAACGAGAGCCCCGCATGGGAGCTTCACTCTTACGTCTTCATTTCCACGACTGCTTTGTTAACGGTTGCGATGGGTCGGTTTTGTTGGACGATATTGCCAATTTCGTAGGAGAAAAGACCGCCTTCCCTAATATAAACTCAATAAGAGGATTTGAAGTCGTCGACCAGATCAAGACGCAGGTTAATAAAGCTTGCAAAGGCAACGTAGTGTCTTGTGCTGACATCTTGGCCATCGCTGCTCGTGACTCCGTCGCAATTCTTGGAGGGCCAAACTACAAAGTACTAATGGGAAGAAGAGATGCAAGAACAGCAAGCGCCAGTGACGCCAACAACAATCTGCCTCCGCCATTTTTCAGCTTCTCACAGCTTCTGTCCAACTTCCAAGCACATGGGCTGGACCTTAAGGACCTGGTGGTGTTGTCGGCCGGCCACACCCTCGGCTACGCCCGCTGCGCCACGTTTCGGACCAGGATTTACAATGACACCAACATCGACCCGAAGTTTGCAGCGGCGTTGCGGAGAAAGTGCCCGCAGAGTGGCGGAGATGGGAATCTTCAGGGCCTTGATGCCACTCCTTATGGCTTTGACACTGCCTACTTCCAGGCATTGTTGAAGAAGAAGGGCCTTCTCCATTCCGACCAGGAGCTCTTCGGTAGCGGCGAGGCGAGCGACGATCTGGTGTCATTTTACAGCAGATACCCTGGTGCCTTCAGAGATGACTTTGGTTCTTCCATGATCAAGATGGGGAATATGAAGCCACTTACTGGATATGATGGGGAGATCAGGAGGAACTGCAGATTTGTCAACTAG 972 50.62 IVSPMAALLRSILLCVFVLSAALSNSQAQLTPNFYNKVCPKALSTIKSVVWQAIKREPRMGASLLRLHFHDCFVNGCDGSVLLDDIANFVGEKTAFPNINSIRGFEVVDQIKTQVNKACKGNVVSCADILAIAARDSVAILGGPNYKVLMGRRDARTASASDANNNLPPPFFSFSQLLSNFQAHGLDLKDLVVLSAGHTLGYARCATFRTRIYNDTNIDPKFAAALRRKCPQSGGDGNLQGLDATPYGFDTAYFQALLKKKGLLHSDQELFGSGEASDDLVSFYSRYPGAFRDDFGSSMIKMGNMKPLTGYDGEIRRNCRFVN 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5520136 5521577 + MC02g0684 Mch2g0802 681724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch2g0802 323 PANTHER PEROXIDASE 72-RELATED 14 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 Gene3D Peroxidase, domain 2 168 302 - -
Mch2g0802 323 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Mch2g0802 323 FunFam Peroxidase 168 302 - -
Mch2g0802 323 Pfam Peroxidase 47 274 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 ProSiteProfiles Plant heme peroxidase family profile. 29 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601(InterPro)
Mch2g0802 323 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 Gene3D - 33 320 - -
Mch2g0802 323 SUPERFAMILY Heme-dependent peroxidases 29 323 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch2g0802 323 CDD secretory_peroxidase 29 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch2g0802 323 FunFam Peroxidase 33 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0802 Mch-Chr2:5520136 Mch4g0127 Mch-Chr4:841842 9.87E-120 dispersed
Mch2g0800 Mch-Chr2:5507204 Mch2g0802 Mch-Chr2:5520136 2.58E-105 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch2g0802 K00430 - csv:101204979 493.812